72 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_08653	FAD-binding PCMH-type domain-containing protein. (445 aa)
	SPPG_08330	Uncharacterized protein. (390 aa)
	SPPG_08703	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (626 aa)
	SPPG_08304	Hist_deacetyl domain-containing protein. (384 aa)
	SPPG_08743	Uncharacterized protein. (1087 aa)
	SPPG_08089	Hist_deacetyl domain-containing protein. (392 aa)
	SPPG_08400	Uncharacterized protein. (506 aa)
	SPPG_07860	Hist_deacetyl domain-containing protein. (364 aa)
	SPPG_08316	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (408 aa)
	SPPG_08314	Uncharacterized protein. (1132 aa)
	SPPG_07985	Thioredoxin-like_fold domain-containing protein. (193 aa)
	SPPG_07926	Uncharacterized protein. (1283 aa)
	SPPG_07930	SANT domain-containing protein. (444 aa)
	SPPG_07771	PAPA-1 domain-containing protein. (345 aa)
	SPPG_09431	Uncharacterized protein. (1688 aa)
	SPPG_09459	Uncharacterized protein. (414 aa)
	SPPG_07397	Chromatin modification-related protein. (310 aa)
	SPPG_07408	Uncharacterized protein. (862 aa)
	SPPG_07413	Uncharacterized protein; Belongs to the actin family. (393 aa)
	SPPG_06561	Uncharacterized protein. (377 aa)
	SPPG_06646	Chromatin modification-related protein. (324 aa)
	SPPG_06453	Uncharacterized protein. (598 aa)
	SPPG_06568	Uncharacterized protein. (855 aa)
	SPPG_06334	Chromatin modification-related protein. (290 aa)
	SPPG_06143	Uncharacterized protein. (2311 aa)
	SPPG_06345	MRG domain-containing protein. (274 aa)
	SPPG_05798	Uncharacterized protein. (555 aa)
	SPPG_09338	Uncharacterized protein. (1218 aa)
	SPPG_05541	Uncharacterized protein. (1216 aa)
	SPPG_05614	Uncharacterized protein. (1904 aa)
	SPPG_05689	Uncharacterized protein. (1830 aa)
	SPPG_05449	Bromo domain-containing protein. (743 aa)
	SPPG_05528	Uncharacterized protein. (249 aa)
	SPPG_04955	Uncharacterized protein. (380 aa)
	SPPG_05024	PHD-type domain-containing protein. (1147 aa)
	SPPG_05312	Histone H2A; Belongs to the histone H2A family. (136 aa)
	SPPG_03759	HIT-type domain-containing protein. (178 aa)
	SPPG_04187	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (456 aa)
	SPPG_04238	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (431 aa)
	SPPG_03851	Enhancer of polycomb-like protein. (1059 aa)
	SPPG_04093	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (478 aa)
	SPPG_04248	MRG domain-containing protein. (293 aa)
	SPPG_03077	Uncharacterized protein. (1031 aa)
	SPPG_04225	ING domain-containing protein. (247 aa)
	SPPG_03253	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (424 aa)
	SPPG_03461	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (732 aa)
	SPPG_03483	F-box domain-containing protein. (204 aa)
	SPPG_03593	SWIRM domain-containing protein. (752 aa)
	SPPG_03662	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (486 aa)
	SPPG_03671	YL1_C domain-containing protein. (556 aa)
	SPPG_02511	Uncharacterized protein. (772 aa)
	SPPG_02778	Uncharacterized protein. (734 aa)
	SPPG_03036	Hist_deacetyl domain-containing protein. (639 aa)
	SPPG_01820	Uncharacterized protein. (572 aa)
	SPPG_01840	Uncharacterized protein. (246 aa)
	SPPG_01776	Uncharacterized protein. (510 aa)
	SPPG_02254	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (461 aa)
	SPPG_02211	Uncharacterized protein. (1426 aa)
	SPPG_01190	HMG box domain-containing protein. (582 aa)
	SPPG_01085	Uncharacterized protein. (1444 aa)
	SPPG_01135	Uncharacterized protein; Belongs to the actin family. (723 aa)
	SPPG_01581	Chromatin modification-related protein. (234 aa)
	SPPG_00072	HDAC_interact domain-containing protein. (1365 aa)
	SPPG_01611	PHD domain-containing protein. (1607 aa)
	SPPG_00456	GFO_IDH_MocA domain-containing protein. (399 aa)
	SPPG_00154	UBP-type domain-containing protein. (156 aa)
	SPPG_00183	Uncharacterized protein. (220 aa)
	SPPG_00248	Uncharacterized protein; Belongs to the actin family. (457 aa)
	SPPG_00491	BCNT-C domain-containing protein. (277 aa)
	SPPG_08872	Uncharacterized protein. (191 aa)
	SPPG_00572	Chromatin modification-related protein. (299 aa)
	SPPG_08862	Uncharacterized protein. (1144 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00072	SPPG_00154	A0A0L0HSK1	A0A0L0HU34	HDAC_interact domain-containing protein.	UBP-type domain-containing protein.	0.804
SPPG_00072	SPPG_00456	A0A0L0HSK1	A0A0L0HTT0	HDAC_interact domain-containing protein.	GFO_IDH_MocA domain-containing protein.	0.505
SPPG_00072	SPPG_00572	A0A0L0HSK1	A0A0L0HVG0	HDAC_interact domain-containing protein.	Chromatin modification-related protein.	0.584
SPPG_00072	SPPG_01581	A0A0L0HSK1	A0A0L0HS11	HDAC_interact domain-containing protein.	Chromatin modification-related protein.	0.584
SPPG_00072	SPPG_01611	A0A0L0HSK1	A0A0L0HSU9	HDAC_interact domain-containing protein.	PHD domain-containing protein.	0.752
SPPG_00072	SPPG_01776	A0A0L0HSK1	A0A0L0HP13	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.712
SPPG_00072	SPPG_01840	A0A0L0HSK1	A0A0L0HNT4	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.987
SPPG_00072	SPPG_02211	A0A0L0HSK1	A0A0L0HQ35	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.956
SPPG_00072	SPPG_02254	A0A0L0HSK1	A0A0L0HQ24	HDAC_interact domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.665
SPPG_00072	SPPG_02511	A0A0L0HSK1	A0A0L0HM64	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.468
SPPG_00072	SPPG_02778	A0A0L0HSK1	A0A0L0HNB4	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.859
SPPG_00072	SPPG_03036	A0A0L0HSK1	A0A0L0HNG4	HDAC_interact domain-containing protein.	Hist_deacetyl domain-containing protein.	0.910
SPPG_00072	SPPG_03077	A0A0L0HSK1	A0A0L0HJH8	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.804
SPPG_00072	SPPG_03253	A0A0L0HSK1	A0A0L0HKT4	HDAC_interact domain-containing protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.767
SPPG_00072	SPPG_03483	A0A0L0HSK1	A0A0L0HKW5	HDAC_interact domain-containing protein.	F-box domain-containing protein.	0.505
SPPG_00072	SPPG_03593	A0A0L0HSK1	A0A0L0HL01	HDAC_interact domain-containing protein.	SWIRM domain-containing protein.	0.463
SPPG_00072	SPPG_03759	A0A0L0HSK1	A0A0L0HHS2	HDAC_interact domain-containing protein.	HIT-type domain-containing protein.	0.434
SPPG_00072	SPPG_04225	A0A0L0HSK1	A0A0L0HJY7	HDAC_interact domain-containing protein.	ING domain-containing protein.	0.564
SPPG_00072	SPPG_04238	A0A0L0HSK1	A0A0L0HI85	HDAC_interact domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.910
SPPG_00072	SPPG_04248	A0A0L0HSK1	A0A0L0HJ77	HDAC_interact domain-containing protein.	MRG domain-containing protein.	0.807