22 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_08235	RNA_pol_L_2 domain-containing protein. (133 aa)
	SPPG_06894	Uncharacterized protein. (1023 aa)
	SPPG_05862	Uncharacterized protein. (1005 aa)
	SPPG_05560	TFIIS N-terminal domain-containing protein. (370 aa)
	SPPG_03998	Uncharacterized protein. (294 aa)
	SPPG_09161	Uncharacterized protein. (431 aa)
	SPPG_04138	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa)
	SPPG_03408	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (905 aa)
	SPPG_03514	Plus3 domain-containing protein. (500 aa)
	SPPG_03166	WD_REPEATS_REGION domain-containing protein. (297 aa)
	SPPG_03220	Uncharacterized protein. (178 aa)
	SPPG_03502	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (722 aa)
	SPPG_03475	RPOLD domain-containing protein. (289 aa)
	SPPG_02666	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (709 aa)
	SPPG_02710	Transcription elongation factor S-II. (304 aa)
	SPPG_02946	Uncharacterized protein. (1557 aa)
	SPPG_02265	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (998 aa)
	SPPG_01488	CDC73_C domain-containing protein. (423 aa)
	SPPG_01655	Uncharacterized protein. (898 aa)
	SPPG_00223	TPR_REGION domain-containing protein. (1144 aa)
	SPPG_00510	RPOL4c domain-containing protein. (180 aa)
	SPPG_00774	Uncharacterized protein. (145 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00223	SPPG_00510	A0A0L0HUB7	A0A0L0HUM9	TPR_REGION domain-containing protein.	RPOL4c domain-containing protein.	0.933
SPPG_00223	SPPG_00774	A0A0L0HUB7	A0A0L0HW29	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.938
SPPG_00223	SPPG_01488	A0A0L0HUB7	A0A0L0HSI8	TPR_REGION domain-containing protein.	CDC73_C domain-containing protein.	0.999
SPPG_00223	SPPG_01655	A0A0L0HUB7	A0A0L0HSY8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.879
SPPG_00223	SPPG_02265	A0A0L0HUB7	A0A0L0HQ79	TPR_REGION domain-containing protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.983
SPPG_00223	SPPG_02710	A0A0L0HUB7	A0A0L0HMC9	TPR_REGION domain-containing protein.	Transcription elongation factor S-II.	0.833
SPPG_00223	SPPG_02946	A0A0L0HUB7	A0A0L0HNT0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.960
SPPG_00223	SPPG_03166	A0A0L0HUB7	A0A0L0HKJ6	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
SPPG_00223	SPPG_03220	A0A0L0HUB7	A0A0L0HKP8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.939
SPPG_00223	SPPG_03408	A0A0L0HUB7	A0A0L0HJI2	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.955
SPPG_00223	SPPG_03475	A0A0L0HUB7	A0A0L0HLA9	TPR_REGION domain-containing protein.	RPOLD domain-containing protein.	0.973
SPPG_00223	SPPG_03502	A0A0L0HUB7	A0A0L0HKY8	TPR_REGION domain-containing protein.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.995
SPPG_00223	SPPG_03514	A0A0L0HUB7	A0A0L0HJT0	TPR_REGION domain-containing protein.	Plus3 domain-containing protein.	0.995
SPPG_00223	SPPG_03998	A0A0L0HUB7	A0A0L0HIL8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
SPPG_00223	SPPG_04138	A0A0L0HUB7	A0A0L0HJH6	TPR_REGION domain-containing protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.955
SPPG_00223	SPPG_05560	A0A0L0HUB7	A0A0L0HCQ9	TPR_REGION domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.865
SPPG_00223	SPPG_05862	A0A0L0HUB7	A0A0L0HCH6	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.903
SPPG_00223	SPPG_06894	A0A0L0HUB7	A0A0L0HB07	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.987
SPPG_00223	SPPG_08235	A0A0L0HUB7	A0A0L0H532	TPR_REGION domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.922
SPPG_00223	SPPG_09161	A0A0L0HUB7	A0A0L0HIW2	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999