24 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_08626	SH3 domain-containing protein. (417 aa)
	SPPG_08262	Rieske domain-containing protein. (146 aa)
	SPPG_07948	Serine/threonine protein kinase. (541 aa)
	SPPG_08225	RING-type domain-containing protein. (1156 aa)
	SPPG_08071	Uncharacterized protein. (3296 aa)
	SPPG_08287	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	SPPG_07565	RING-type domain-containing protein. (399 aa)
	SPPG_06227	Polyubiquitin. (381 aa)
	SPPG_05947	Alternative oxidase. (317 aa)
	SPPG_04890	CUE domain-containing protein. (828 aa)
	SPPG_05474	ANK_REP_REGION domain-containing protein. (476 aa)
	SPPG_05216	ANK_REP_REGION domain-containing protein. (564 aa)
	SPPG_05208	IRE protein kinase. (1060 aa)
	SPPG_04006	Uncharacterized protein. (186 aa)
	SPPG_03961	Ubiquitin-60S ribosomal protein L40. (128 aa)
	SPPG_03893	RING-type domain-containing protein. (231 aa)
	SPPG_03892	Uncharacterized protein. (276 aa)
	SPPG_02560	Uncharacterized protein. (1693 aa)
	SPPG_09026	Peptidase_S15 domain-containing protein. (285 aa)
	SPPG_01957	PPM-type phosphatase domain-containing protein. (590 aa)
	SPPG_02029	Uncharacterized protein. (371 aa)
	SPPG_01386	Uncharacterized protein. (163 aa)
	SPPG_01550	Ubiquitin carboxyl-terminal hydrolase. (603 aa)
	SPPG_00365	Uncharacterized protein. (345 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00365	SPPG_01386	A0A0L0HUV6	A0A0L0HRD4	Uncharacterized protein.	Uncharacterized protein.	0.690
SPPG_00365	SPPG_01550	A0A0L0HUV6	A0A0L0HRY0	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.671
SPPG_00365	SPPG_02029	A0A0L0HUV6	A0A0L0HPQ5	Uncharacterized protein.	Uncharacterized protein.	0.977
SPPG_00365	SPPG_02560	A0A0L0HUV6	A0A0L0HKR3	Uncharacterized protein.	Uncharacterized protein.	0.663
SPPG_00365	SPPG_03892	A0A0L0HUV6	A0A0L0HIX6	Uncharacterized protein.	Uncharacterized protein.	0.725
SPPG_00365	SPPG_03893	A0A0L0HUV6	A0A0L0HIR3	Uncharacterized protein.	RING-type domain-containing protein.	0.725
SPPG_00365	SPPG_04006	A0A0L0HUV6	A0A0L0HHH1	Uncharacterized protein.	Uncharacterized protein.	0.540
SPPG_00365	SPPG_04890	A0A0L0HUV6	A0A0L0HDD4	Uncharacterized protein.	CUE domain-containing protein.	0.690
SPPG_00365	SPPG_05208	A0A0L0HUV6	A0A0L0HFX5	Uncharacterized protein.	IRE protein kinase.	0.529
SPPG_00365	SPPG_05216	A0A0L0HUV6	A0A0L0HFD9	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.977
SPPG_00365	SPPG_05474	A0A0L0HUV6	A0A0L0HEN7	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.550
SPPG_00365	SPPG_05947	A0A0L0HUV6	A0A0L0HDB1	Uncharacterized protein.	Alternative oxidase.	0.625
SPPG_00365	SPPG_06227	A0A0L0HUV6	A0A0L0HAE3	Uncharacterized protein.	Polyubiquitin.	0.853
SPPG_00365	SPPG_07565	A0A0L0HUV6	A0A0L0H947	Uncharacterized protein.	RING-type domain-containing protein.	0.791
SPPG_00365	SPPG_07948	A0A0L0HUV6	A0A0L0H5F6	Uncharacterized protein.	Serine/threonine protein kinase.	0.625
SPPG_00365	SPPG_08071	A0A0L0HUV6	A0A0L0H6E4	Uncharacterized protein.	Uncharacterized protein.	0.540
SPPG_00365	SPPG_08225	A0A0L0HUV6	A0A0L0H5S5	Uncharacterized protein.	RING-type domain-containing protein.	0.791
SPPG_00365	SPPG_08262	A0A0L0HUV6	A0A0L0H561	Uncharacterized protein.	Rieske domain-containing protein.	0.690
SPPG_00365	SPPG_08287	A0A0L0HUV6	A0A0L0H6N1	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.809
SPPG_00365	SPPG_08626	A0A0L0HUV6	A0A0L0H535	Uncharacterized protein.	SH3 domain-containing protein.	0.977