STRINGSTRING
SPPG_07894 SPPG_07894 SPPG_07216 SPPG_07216 SPPG_07838 SPPG_07838 SPPG_08014 SPPG_08014 SPPG_08019 SPPG_08019 SPPG_07766 SPPG_07766 SPPG_06795 SPPG_06795 SPPG_07221 SPPG_07221 SPPG_07028 SPPG_07028 SPPG_06761 SPPG_06761 SPPG_06526 SPPG_06526 SPPG_06885 SPPG_06885 SPPG_06973 SPPG_06973 SPPG_06228 SPPG_06228 SPPG_06333 SPPG_06333 PAN3 PAN3 SPPG_05894 SPPG_05894 SPPG_05695 SPPG_05695 SPPG_09279 SPPG_09279 SPPG_05500 SPPG_05500 SPPG_05340 SPPG_05340 SPPG_04528 SPPG_04528 SPPG_04546 SPPG_04546 SPPG_03852 SPPG_03852 SPPG_04599 SPPG_04599 LSM5 LSM5 SPPG_03755 SPPG_03755 SPPG_04129 SPPG_04129 SPPG_03913 SPPG_03913 SPPG_03930 SPPG_03930 SPPG_03989 SPPG_03989 SPPG_03331 SPPG_03331 SPPG_03535 SPPG_03535 SPPG_03536 SPPG_03536 SPPG_02812 SPPG_02812 SPPG_02565 SPPG_02565 SPPG_03649 SPPG_03649 SPPG_02914 SPPG_02914 SPPG_01702 SPPG_01702 SPPG_01831 SPPG_01831 SPPG_01722 SPPG_01722 SPPG_00965 SPPG_00965 SPPG_01960 SPPG_01960 SPPG_02009 SPPG_02009 SPPG_02185 SPPG_02185 PAN2 PAN2 LSM4 LSM4 SPPG_08940 SPPG_08940 SPPG_01610 SPPG_01610 SPPG_00092 SPPG_00092 SPPG_00574 SPPG_00574 LSM1 LSM1 SPPG_00674 SPPG_00674 SPPG_00723 SPPG_00723 SPPG_00376 SPPG_00376 LSM3 LSM3 SPPG_00707 SPPG_00707
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPPG_07894Uncharacterized protein. (548 aa)
SPPG_07216Anti_prolifrtn domain-containing protein. (179 aa)
SPPG_07838Uncharacterized protein. (2155 aa)
SPPG_08014U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
SPPG_08019Endo/exonuclease/phosphatase domain-containing protein. (672 aa)
SPPG_07766Uncharacterized protein. (799 aa)
SPPG_06795Uncharacterized protein. (818 aa)
SPPG_07221Uncharacterized protein. (446 aa)
SPPG_07028Uncharacterized protein. (363 aa)
SPPG_06761Uncharacterized protein. (1008 aa)
SPPG_06526Endo/exonuclease/phosphatase domain-containing protein. (725 aa)
SPPG_06885Uncharacterized protein. (703 aa)
SPPG_06973ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. (422 aa)
SPPG_06228Nudix hydrolase domain-containing protein. (422 aa)
SPPG_06333Uncharacterized protein. (643 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (651 aa)
SPPG_05894Uncharacterized protein. (1010 aa)
SPPG_05695Nudix hydrolase domain-containing protein. (1444 aa)
SPPG_09279Uncharacterized protein. (1385 aa)
SPPG_05500Anti_prolifrtn domain-containing protein. (185 aa)
SPPG_05340CCHC-type domain-containing protein. (1009 aa)
SPPG_04528Uncharacterized protein. (653 aa)
SPPG_04546Uncharacterized protein. (1118 aa)
SPPG_03852Uncharacterized protein. (446 aa)
SPPG_04599Uncharacterized protein. (392 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
SPPG_03755Uncharacterized protein. (1751 aa)
SPPG_04129Nudix hydrolase domain-containing protein. (299 aa)
SPPG_03913Nudix hydrolase domain-containing protein. (226 aa)
SPPG_03930Uncharacterized protein. (604 aa)
SPPG_03989Uncharacterized protein. (485 aa)
SPPG_03331Uncharacterized protein. (388 aa)
SPPG_03535Cell differentiation protein rcd1. (341 aa)
SPPG_03536Sm domain-containing protein. (126 aa)
SPPG_02812NOT2_3_5 domain-containing protein. (475 aa)
SPPG_02565Uncharacterized protein. (643 aa)
SPPG_03649Uncharacterized protein. (333 aa)
SPPG_02914Uncharacterized protein. (113 aa)
SPPG_01702Uncharacterized protein. (347 aa)
SPPG_01831Nudix hydrolase domain-containing protein. (264 aa)
SPPG_01722Uncharacterized protein; Belongs to the DEAD box helicase family. (522 aa)
SPPG_00965Uncharacterized protein. (989 aa)
SPPG_01960RRM domain-containing protein. (507 aa)
SPPG_02009Uncharacterized protein. (426 aa)
SPPG_02185RRM domain-containing protein. (1032 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1041 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (119 aa)
SPPG_08940Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (248 aa)
SPPG_01610Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (721 aa)
SPPG_00092ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. (404 aa)
SPPG_00574Nudix hydrolase domain-containing protein. (332 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (136 aa)
SPPG_00674Uncharacterized protein. (253 aa)
SPPG_00723Uncharacterized protein. (280 aa)
SPPG_00376MI domain-containing protein. (1884 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
SPPG_00707CUE domain-containing protein. (183 aa)
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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