6 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_01635	Uncharacterized protein. (518 aa)
	SPPG_00858	Uncharacterized protein. (700 aa)
	SPPG_08084	Uncharacterized protein. (1692 aa)
	SPPG_07817	WD_REPEATS_REGION domain-containing protein. (337 aa)
	SPPG_07535	FoP_duplication domain-containing protein. (192 aa)
	SPPG_00361	Uncharacterized protein. (221 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00361	SPPG_00858	A0A0L0HUT0	A0A0L0HVQ9	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_00361	SPPG_01635	A0A0L0HUT0	A0A0L0HT00	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_00361	SPPG_07535	A0A0L0HUT0	A0A0L0H890	Uncharacterized protein.	FoP_duplication domain-containing protein.	0.767
SPPG_00361	SPPG_07817	A0A0L0HUT0	A0A0L0H7V1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
SPPG_00361	SPPG_08084	A0A0L0HUT0	A0A0L0H4Q8	Uncharacterized protein.	Uncharacterized protein.	0.998
SPPG_00858	SPPG_00361	A0A0L0HVQ9	A0A0L0HUT0	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_00858	SPPG_01635	A0A0L0HVQ9	A0A0L0HT00	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_00858	SPPG_07535	A0A0L0HVQ9	A0A0L0H890	Uncharacterized protein.	FoP_duplication domain-containing protein.	0.783
SPPG_00858	SPPG_07817	A0A0L0HVQ9	A0A0L0H7V1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
SPPG_00858	SPPG_08084	A0A0L0HVQ9	A0A0L0H4Q8	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_01635	SPPG_00361	A0A0L0HT00	A0A0L0HUT0	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_01635	SPPG_00858	A0A0L0HT00	A0A0L0HVQ9	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_01635	SPPG_07535	A0A0L0HT00	A0A0L0H890	Uncharacterized protein.	FoP_duplication domain-containing protein.	0.810
SPPG_01635	SPPG_07817	A0A0L0HT00	A0A0L0H7V1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
SPPG_01635	SPPG_08084	A0A0L0HT00	A0A0L0H4Q8	Uncharacterized protein.	Uncharacterized protein.	0.998
SPPG_07535	SPPG_00361	A0A0L0H890	A0A0L0HUT0	FoP_duplication domain-containing protein.	Uncharacterized protein.	0.767
SPPG_07535	SPPG_00858	A0A0L0H890	A0A0L0HVQ9	FoP_duplication domain-containing protein.	Uncharacterized protein.	0.783
SPPG_07535	SPPG_01635	A0A0L0H890	A0A0L0HT00	FoP_duplication domain-containing protein.	Uncharacterized protein.	0.810
SPPG_07535	SPPG_07817	A0A0L0H890	A0A0L0H7V1	FoP_duplication domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.628
SPPG_07535	SPPG_08084	A0A0L0H890	A0A0L0H4Q8	FoP_duplication domain-containing protein.	Uncharacterized protein.	0.786