30 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_05152	UBIQUITIN_CONJUGAT_2 domain-containing protein. (619 aa)
	SPPG_08882	Uncharacterized protein. (1388 aa)
	SPPG_00703	WD_REPEATS_REGION domain-containing protein. (772 aa)
	SPPG_00821	Uncharacterized protein. (482 aa)
	SPPG_01401	WD_REPEATS_REGION domain-containing protein. (885 aa)
	SPPG_01445	Uncharacterized protein. (1139 aa)
	SPPG_01851	Uncharacterized protein. (1423 aa)
	SPPG_01764	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (770 aa)
	SPPG_02742	Small GTP-binding protein domain. (492 aa)
	SPPG_03194	Uncharacterized protein. (1298 aa)
	SPPG_04146	Uncharacterized protein. (426 aa)
	SPPG_03998	Uncharacterized protein. (294 aa)
	SPPG_03748	Uncharacterized protein. (1071 aa)
	SPPG_03805	Uncharacterized protein. (598 aa)
	SPPG_04486	Uncharacterized protein. (527 aa)
	SPPG_09150	CUB domain-containing protein. (942 aa)
	SPPG_04403	Uncharacterized protein. (579 aa)
	SPPG_04600	Uncharacterized protein. (983 aa)
	SPPG_03749	Uncharacterized protein. (941 aa)
	SPPG_05909	Uncharacterized protein. (1246 aa)
	SPPG_06316	Uncharacterized protein. (1058 aa)
	SPPG_05835	Uncharacterized protein. (157 aa)
	SPPG_05870	Uncharacterized protein. (1199 aa)
	SPPG_09416	Uncharacterized protein. (141 aa)
	SPPG_07796	Uncharacterized protein. (970 aa)
	SPPG_07463	Uncharacterized protein. (192 aa)
	SPPG_07676	2,3-diketo-5-methylthio-1-phosphopentane phosphatase. (266 aa)
	SPPG_07904	Uncharacterized protein. (4534 aa)
	SPPG_08737	RING-type domain-containing protein. (386 aa)
	SPPG_08607	Uncharacterized protein. (637 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00703	SPPG_00821	A0A0L0HVX2	A0A0L0HVL7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.970
SPPG_00703	SPPG_01764	A0A0L0HVX2	A0A0L0HPF9	WD_REPEATS_REGION domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.441
SPPG_00703	SPPG_01851	A0A0L0HVX2	A0A0L0HPP5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.915
SPPG_00703	SPPG_03805	A0A0L0HVX2	A0A0L0HHW9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.990
SPPG_00703	SPPG_05152	A0A0L0HVX2	A0A0L0HE90	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.721
SPPG_00703	SPPG_07796	A0A0L0HVX2	A0A0L0H8G7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.597
SPPG_00821	SPPG_00703	A0A0L0HVL7	A0A0L0HVX2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.970
SPPG_00821	SPPG_01851	A0A0L0HVL7	A0A0L0HPP5	Uncharacterized protein.	Uncharacterized protein.	0.862
SPPG_00821	SPPG_02742	A0A0L0HVL7	A0A0L0HN83	Uncharacterized protein.	Small GTP-binding protein domain.	0.622
SPPG_00821	SPPG_03805	A0A0L0HVL7	A0A0L0HHW9	Uncharacterized protein.	Uncharacterized protein.	0.969
SPPG_00821	SPPG_07904	A0A0L0HVL7	A0A0L0H746	Uncharacterized protein.	Uncharacterized protein.	0.686
SPPG_01401	SPPG_02742	A0A0L0HSR6	A0A0L0HN83	WD_REPEATS_REGION domain-containing protein.	Small GTP-binding protein domain.	0.420
SPPG_01401	SPPG_03194	A0A0L0HSR6	A0A0L0HJT2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.503
SPPG_01401	SPPG_03748	A0A0L0HSR6	A0A0L0HIC6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.680
SPPG_01401	SPPG_03998	A0A0L0HSR6	A0A0L0HIL8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.410
SPPG_01401	SPPG_04486	A0A0L0HSR6	A0A0L0HGZ5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.836
SPPG_01401	SPPG_05152	A0A0L0HSR6	A0A0L0HE90	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.562
SPPG_01764	SPPG_00703	A0A0L0HPF9	A0A0L0HVX2	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	WD_REPEATS_REGION domain-containing protein.	0.441
SPPG_01851	SPPG_00703	A0A0L0HPP5	A0A0L0HVX2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.915
SPPG_01851	SPPG_00821	A0A0L0HPP5	A0A0L0HVL7	Uncharacterized protein.	Uncharacterized protein.	0.862