STRINGSTRING
SPPG_05115 SPPG_05115 SPPG_01488 SPPG_01488 SPPG_01442 SPPG_01442 SPPG_00164 SPPG_00164 CLP1 CLP1 SPPG_00510 SPPG_00510 SPPG_08084 SPPG_08084 SPPG_08581 SPPG_08581 SPPG_07436 SPPG_07436 SPPG_06925 SPPG_06925 SPPG_06553 SPPG_06553 SPPG_06005 SPPG_06005 SPPG_05550 SPPG_05550 SPPG_01134 SPPG_01134 SPPG_05702 SPPG_05702 SPPG_04928 SPPG_04928 SPPG_03998 SPPG_03998 SPPG_03514 SPPG_03514 SPPG_09088 SPPG_09088 SPPG_03468 SPPG_03468 SPPG_02670 SPPG_02670 SPPG_09124 SPPG_09124 SPPG_03038 SPPG_03038 SPPG_01899 SPPG_01899 SPPG_02145 SPPG_02145 SPPG_01555 SPPG_01555
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPPG_05115Cleavage and polyadenylation specificity factor subunit 2. (772 aa)
SPPG_01488CDC73_C domain-containing protein. (423 aa)
SPPG_01442WD_REPEATS_REGION domain-containing protein. (330 aa)
SPPG_00164Uncharacterized protein. (855 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (448 aa)
SPPG_00510RPOL4c domain-containing protein. (180 aa)
SPPG_08084Uncharacterized protein. (1692 aa)
SPPG_08581Uncharacterized protein. (458 aa)
SPPG_07436Fip1 domain-containing protein. (393 aa)
SPPG_06925Nuclear export factor GLE1. (206 aa)
SPPG_06553Uncharacterized protein. (689 aa)
SPPG_06005WD_REPEATS_REGION domain-containing protein. (620 aa)
SPPG_05550SLBP_RNA_bind domain-containing protein. (625 aa)
SPPG_01134Uncharacterized protein. (275 aa)
SPPG_05702RRM domain-containing protein. (347 aa)
SPPG_04928Suf domain-containing protein. (926 aa)
SPPG_03998Uncharacterized protein. (294 aa)
SPPG_03514Plus3 domain-containing protein. (500 aa)
SPPG_09088CID domain-containing protein. (365 aa)
SPPG_03468Uncharacterized protein. (1242 aa)
SPPG_02670Uncharacterized protein. (692 aa)
SPPG_09124Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (202 aa)
SPPG_03038Uncharacterized protein. (897 aa)
SPPG_01899RRM domain-containing protein. (269 aa)
SPPG_02145WD_REPEATS_REGION domain-containing protein. (440 aa)
SPPG_01555CID domain-containing protein. (762 aa)
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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