STRINGSTRING
SPPG_07236 SPPG_07236 SPPG_07955 SPPG_07955 SPPG_09125 SPPG_09125 SPPG_01636 SPPG_01636 SPPG_00566 SPPG_00566 SPPG_01470 SPPG_01470 SPPG_03613 SPPG_03613 SPPG_02478 SPPG_02478 URM1 URM1 SPPG_03961 SPPG_03961 SPPG_06203 SPPG_06203 SPPG_06227 SPPG_06227
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPPG_07236Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (148 aa)
SPPG_07955CIA30 domain-containing protein. (202 aa)
SPPG_09125NEDD8 protein. (78 aa)
SPPG_01636Ubiquitin-40S ribosomal protein S27a. (158 aa)
SPPG_00566Ubiquitin-like protein 5. (82 aa)
SPPG_01470RRN7-type domain-containing protein. (527 aa)
SPPG_03613Polyubiquitin. (243 aa)
SPPG_02478Rad60-SLD domain-containing protein. (313 aa)
URM1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (101 aa)
SPPG_03961Ubiquitin-60S ribosomal protein L40. (128 aa)
SPPG_06203Ubiquitin-40S ribosomal protein S27a. (158 aa)
SPPG_06227Polyubiquitin. (381 aa)
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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