24 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_07218	Uncharacterized protein. (328 aa)
	SPPG_07379	DBF4-type domain-containing protein. (1221 aa)
	SPPG_07965	Uncharacterized protein. (565 aa)
	SPPG_07797	Uncharacterized protein. (658 aa)
	SPPG_08111	STE/STE20/FRAY protein kinase. (419 aa)
	SPPG_08261	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	SPPG_08582	SAP domain-containing protein. (499 aa)
	SPPG_00518	CDK-activating kinase assembly factor MAT1. (309 aa)
	SPPG_01841	WD_REPEATS_REGION domain-containing protein. (239 aa)
	SPPG_02826	Calcium-binding protein NCS-1. (190 aa)
	SPPG_03246	Uncharacterized protein. (212 aa)
	SPPG_04031	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (117 aa)
	SPPG_05326	DH domain-containing protein. (535 aa)
	SPPG_06280	Uncharacterized protein. (345 aa)
	SPPG_06323	Mps one binder kinase activator-like 1A. (227 aa)
	SPPG_09501	CAMK/CAMKL/LKB protein kinase. (861 aa)
	SPPG_00206	Uncharacterized protein. (1122 aa)
	SPPG_00631	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (463 aa)
	SPPG_00358	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (388 aa)
	SPPG_00147	TOG domain-containing protein. (2792 aa)
	SPPG_00048	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	SPPG_01141	Uncharacterized protein. (415 aa)
	SPPG_01153	Uncharacterized protein. (1010 aa)
	SPPG_01842	Raptor_N domain-containing protein. (216 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00048	SPPG_06280	A0A0L0HT86	A0A0L0HCE6	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	Uncharacterized protein.	0.938
SPPG_00147	SPPG_06280	A0A0L0HTH3	A0A0L0HCE6	TOG domain-containing protein.	Uncharacterized protein.	0.644
SPPG_00206	SPPG_01141	A0A0L0HUD0	A0A0L0HRZ7	Uncharacterized protein.	Uncharacterized protein.	0.752
SPPG_00518	SPPG_02826	A0A0L0HV92	A0A0L0HLP8	CDK-activating kinase assembly factor MAT1.	Calcium-binding protein NCS-1.	0.504
SPPG_01141	SPPG_00206	A0A0L0HRZ7	A0A0L0HUD0	Uncharacterized protein.	Uncharacterized protein.	0.752
SPPG_01141	SPPG_07797	A0A0L0HRZ7	A0A0L0H7N7	Uncharacterized protein.	Uncharacterized protein.	0.457
SPPG_01841	SPPG_01842	A0A0L0HNX6	A0A0L0HPN5	WD_REPEATS_REGION domain-containing protein.	Raptor_N domain-containing protein.	0.930
SPPG_01841	SPPG_09501	A0A0L0HNX6	A0A0L0H8F9	WD_REPEATS_REGION domain-containing protein.	CAMK/CAMKL/LKB protein kinase.	0.721
SPPG_01842	SPPG_01841	A0A0L0HPN5	A0A0L0HNX6	Raptor_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.930
SPPG_01842	SPPG_09501	A0A0L0HPN5	A0A0L0H8F9	Raptor_N domain-containing protein.	CAMK/CAMKL/LKB protein kinase.	0.721
SPPG_02826	SPPG_00518	A0A0L0HLP8	A0A0L0HV92	Calcium-binding protein NCS-1.	CDK-activating kinase assembly factor MAT1.	0.504
SPPG_02826	SPPG_09501	A0A0L0HLP8	A0A0L0H8F9	Calcium-binding protein NCS-1.	CAMK/CAMKL/LKB protein kinase.	0.600
SPPG_03246	SPPG_06323	A0A0L0HK01	A0A0L0HBT3	Uncharacterized protein.	Mps one binder kinase activator-like 1A.	0.829
SPPG_03246	SPPG_07218	A0A0L0HK01	A0A0L0H8N5	Uncharacterized protein.	Uncharacterized protein.	0.609
SPPG_06280	SPPG_00048	A0A0L0HCE6	A0A0L0HT86	Uncharacterized protein.	60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.938
SPPG_06280	SPPG_00147	A0A0L0HCE6	A0A0L0HTH3	Uncharacterized protein.	TOG domain-containing protein.	0.644
SPPG_06280	SPPG_08261	A0A0L0HCE6	A0A0L0H618	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.938
SPPG_06323	SPPG_03246	A0A0L0HBT3	A0A0L0HK01	Mps one binder kinase activator-like 1A.	Uncharacterized protein.	0.829
SPPG_06323	SPPG_08582	A0A0L0HBT3	A0A0L0H4T3	Mps one binder kinase activator-like 1A.	SAP domain-containing protein.	0.674
SPPG_07218	SPPG_03246	A0A0L0H8N5	A0A0L0HK01	Uncharacterized protein.	Uncharacterized protein.	0.609