13 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_09566	Thioredoxin. (175 aa)
	SPPG_01540	Oxidored_FMN domain-containing protein. (407 aa)
	SPPG_01659	DLH domain-containing protein. (224 aa)
	SPPG_01187	Thioredoxin domain-containing protein. (226 aa)
	SPPG_01397	Thioredoxin domain-containing protein. (180 aa)
	SPPG_01812	Thioredoxin domain-containing protein. (194 aa)
	SPPG_02979	Thioredoxin domain-containing protein. (238 aa)
	SPPG_03025	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (461 aa)
	SPPG_03324	Thioredoxin domain-containing protein. (197 aa)
	SPPG_03281	Thioredoxin reductase. (391 aa)
	SPPG_06076	Dihydrolipoyl dehydrogenase. (504 aa)
	SPPG_06867	FERM domain-containing protein. (831 aa)
	SPPG_07030	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (209 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_01187	SPPG_01397	A0A0L0HRL4	A0A0L0HRE4	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.425
SPPG_01187	SPPG_01812	A0A0L0HRL4	A0A0L0HPK3	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.425
SPPG_01187	SPPG_02979	A0A0L0HRL4	A0A0L0HNJ4	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.471
SPPG_01187	SPPG_03025	A0A0L0HRL4	A0A0L0HNF4	Thioredoxin domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.866
SPPG_01187	SPPG_03281	A0A0L0HRL4	A0A0L0HKQ6	Thioredoxin domain-containing protein.	Thioredoxin reductase.	0.762
SPPG_01187	SPPG_03324	A0A0L0HRL4	A0A0L0HKV0	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.469
SPPG_01187	SPPG_06076	A0A0L0HRL4	A0A0L0HC63	Thioredoxin domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.665
SPPG_01187	SPPG_07030	A0A0L0HRL4	A0A0L0H8N0	Thioredoxin domain-containing protein.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.898
SPPG_01187	SPPG_09566	A0A0L0HRL4	A0A0L0H4V2	Thioredoxin domain-containing protein.	Thioredoxin.	0.785
SPPG_01397	SPPG_01187	A0A0L0HRE4	A0A0L0HRL4	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.425
SPPG_01540	SPPG_03025	A0A0L0HTB0	A0A0L0HNF4	Oxidored_FMN domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.510
SPPG_01540	SPPG_03281	A0A0L0HTB0	A0A0L0HKQ6	Oxidored_FMN domain-containing protein.	Thioredoxin reductase.	0.422
SPPG_01540	SPPG_06076	A0A0L0HTB0	A0A0L0HC63	Oxidored_FMN domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.441
SPPG_01659	SPPG_03025	A0A0L0HSZ2	A0A0L0HNF4	DLH domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.447
SPPG_01659	SPPG_06076	A0A0L0HSZ2	A0A0L0HC63	DLH domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.447
SPPG_01812	SPPG_01187	A0A0L0HPK3	A0A0L0HRL4	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.425
SPPG_02979	SPPG_01187	A0A0L0HNJ4	A0A0L0HRL4	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.471
SPPG_02979	SPPG_03025	A0A0L0HNJ4	A0A0L0HNF4	Thioredoxin domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.723
SPPG_02979	SPPG_03281	A0A0L0HNJ4	A0A0L0HKQ6	Thioredoxin domain-containing protein.	Thioredoxin reductase.	0.797
SPPG_02979	SPPG_06076	A0A0L0HNJ4	A0A0L0HC63	Thioredoxin domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.661