23 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_06806	GATA-type domain-containing protein. (387 aa)
	SPPG_08006	GATA-type domain-containing protein. (1022 aa)
	SPPG_07332	GATA-type domain-containing protein. (356 aa)
	SPPG_09382	Uncharacterized protein. (484 aa)
	SPPG_07078	Uncharacterized protein. (1384 aa)
	SPPG_07329	GATA-type domain-containing protein. (314 aa)
	SPPG_06657	Uncharacterized protein. (577 aa)
	SPPG_06468	GATA-type domain-containing protein. (467 aa)
	SPPG_06547	Uncharacterized protein. (538 aa)
	SPPG_06164	PAS domain S-box protein. (392 aa)
	SPPG_09338	Uncharacterized protein. (1218 aa)
	SPPG_04959	Uncharacterized protein. (1590 aa)
	SPPG_05492	GATA-type domain-containing protein. (576 aa)
	SPPG_04393	Uncharacterized protein. (646 aa)
	SPPG_04028	GATA-type domain-containing protein. (417 aa)
	SPPG_03947	GATA-type domain-containing protein. (770 aa)
	SPPG_03179	GATA-type domain-containing protein. (767 aa)
	SPPG_09046	Uncharacterized protein. (700 aa)
	SPPG_01741	GATA-type domain-containing protein. (428 aa)
	SPPG_02143	Uncharacterized protein. (491 aa)
	SPPG_02054	GATA-type domain-containing protein. (528 aa)
	SPPG_01578	White collar 2 protein. (446 aa)
	SPPG_00811	GATA-type domain-containing protein. (1186 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_01578	SPPG_09046	A0A0L0HSR5	A0A0L0HL49	White collar 2 protein.	Uncharacterized protein.	0.639
SPPG_01741	SPPG_02143	A0A0L0HNY2	A0A0L0HPX7	GATA-type domain-containing protein.	Uncharacterized protein.	0.580
SPPG_01741	SPPG_03179	A0A0L0HNY2	A0A0L0HIT0	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.490
SPPG_01741	SPPG_04028	A0A0L0HNY2	A0A0L0HHI7	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.490
SPPG_01741	SPPG_04393	A0A0L0HNY2	A0A0L0HGX0	GATA-type domain-containing protein.	Uncharacterized protein.	0.490
SPPG_01741	SPPG_05492	A0A0L0HNY2	A0A0L0HDZ7	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.490
SPPG_01741	SPPG_06547	A0A0L0HNY2	A0A0L0HBN8	GATA-type domain-containing protein.	Uncharacterized protein.	0.490
SPPG_01741	SPPG_06806	A0A0L0HNY2	A0A0L0H9X1	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.490
SPPG_02143	SPPG_01741	A0A0L0HPX7	A0A0L0HNY2	Uncharacterized protein.	GATA-type domain-containing protein.	0.580
SPPG_02143	SPPG_03179	A0A0L0HPX7	A0A0L0HIT0	Uncharacterized protein.	GATA-type domain-containing protein.	0.518
SPPG_02143	SPPG_04028	A0A0L0HPX7	A0A0L0HHI7	Uncharacterized protein.	GATA-type domain-containing protein.	0.593
SPPG_02143	SPPG_04393	A0A0L0HPX7	A0A0L0HGX0	Uncharacterized protein.	Uncharacterized protein.	0.578
SPPG_02143	SPPG_05492	A0A0L0HPX7	A0A0L0HDZ7	Uncharacterized protein.	GATA-type domain-containing protein.	0.518
SPPG_02143	SPPG_06547	A0A0L0HPX7	A0A0L0HBN8	Uncharacterized protein.	Uncharacterized protein.	0.577
SPPG_02143	SPPG_06806	A0A0L0HPX7	A0A0L0H9X1	Uncharacterized protein.	GATA-type domain-containing protein.	0.518
SPPG_03179	SPPG_01741	A0A0L0HIT0	A0A0L0HNY2	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.490
SPPG_03179	SPPG_02143	A0A0L0HIT0	A0A0L0HPX7	GATA-type domain-containing protein.	Uncharacterized protein.	0.518
SPPG_03947	SPPG_09046	A0A0L0HIG4	A0A0L0HL49	GATA-type domain-containing protein.	Uncharacterized protein.	0.578
SPPG_04028	SPPG_01741	A0A0L0HHI7	A0A0L0HNY2	GATA-type domain-containing protein.	GATA-type domain-containing protein.	0.490
SPPG_04028	SPPG_02143	A0A0L0HHI7	A0A0L0HPX7	GATA-type domain-containing protein.	Uncharacterized protein.	0.593