31 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_00510	RPOL4c domain-containing protein. (180 aa)
	SPPG_08550	Cyclin ccl1; Belongs to the cyclin family. (354 aa)
	SPPG_08235	RNA_pol_L_2 domain-containing protein. (133 aa)
	SPPG_09468	DNA repair helicase rad25. (934 aa)
	SPPG_07395	BSD domain-containing protein. (548 aa)
	SPPG_06255	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (432 aa)
	SPPG_05862	Uncharacterized protein. (1005 aa)
	SPPG_03982	CMGC/CDK/CDK7 protein kinase. (353 aa)
	SPPG_04138	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa)
	SPPG_03408	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (905 aa)
	SPPG_09181	DNA repair helicase (Rad3). (1252 aa)
	SPPG_04220	Uncharacterized protein. (358 aa)
	SPPG_03220	Uncharacterized protein. (178 aa)
	SPPG_09110	Uncharacterized protein. (208 aa)
	SPPG_03475	RPOLD domain-containing protein. (289 aa)
	SPPG_02666	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (709 aa)
	SPPG_03001	MIF4G domain-containing protein. (838 aa)
	SPPG_03016	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	SPPG_00774	Uncharacterized protein. (145 aa)
	SPPG_00731	Uncharacterized protein. (330 aa)
	SPPG_00518	CDK-activating kinase assembly factor MAT1. (309 aa)
	SPPG_00380	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1799 aa)
	SPPG_00548	Transcription factor tfb4. (288 aa)
	SPPG_00970	Uncharacterized protein. (445 aa)
	SPPG_02265	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (998 aa)
	SPPG_02356	DNA repair helicase rad25. (827 aa)
	SPPG_00881	FCP1 homology domain-containing protein. (592 aa)
	SPPG_01151	Uncharacterized protein. (621 aa)
	SPPG_01655	Uncharacterized protein. (898 aa)
	SPPG_01512	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (477 aa)
	SPPG_00516	Nuclear cap-binding protein subunit 2. (221 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00380	SPPG_00510	A0A0L0HUU6	A0A0L0HUM9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOL4c domain-containing protein.	0.958
SPPG_00380	SPPG_00516	A0A0L0HUU6	A0A0L0HUL4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap-binding protein subunit 2.	0.705
SPPG_00380	SPPG_00518	A0A0L0HUU6	A0A0L0HV92	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CDK-activating kinase assembly factor MAT1.	0.915
SPPG_00380	SPPG_00548	A0A0L0HUU6	A0A0L0HUP0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription factor tfb4.	0.915
SPPG_00380	SPPG_00731	A0A0L0HUU6	A0A0L0HVX9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.943
SPPG_00380	SPPG_00774	A0A0L0HUU6	A0A0L0HW29	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.958
SPPG_00380	SPPG_00881	A0A0L0HUU6	A0A0L0HQQ0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	FCP1 homology domain-containing protein.	0.786
SPPG_00380	SPPG_00970	A0A0L0HUU6	A0A0L0HPX9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.886
SPPG_00380	SPPG_01151	A0A0L0HUU6	A0A0L0HS56	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.917
SPPG_00380	SPPG_01512	A0A0L0HUU6	A0A0L0HT65	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.910
SPPG_00380	SPPG_02265	A0A0L0HUU6	A0A0L0HQ79	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.951
SPPG_00380	SPPG_02356	A0A0L0HUU6	A0A0L0HQG7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA repair helicase rad25.	0.898
SPPG_00380	SPPG_02666	A0A0L0HUU6	A0A0L0HM61	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.938
SPPG_00380	SPPG_03001	A0A0L0HUU6	A0A0L0HNA1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	MIF4G domain-containing protein.	0.694
SPPG_00380	SPPG_03016	A0A0L0HUU6	A0A0L0HNB5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.958
SPPG_00380	SPPG_03220	A0A0L0HUU6	A0A0L0HKP8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.958
SPPG_00380	SPPG_03408	A0A0L0HUU6	A0A0L0HJI2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.969
SPPG_00380	SPPG_03475	A0A0L0HUU6	A0A0L0HLA9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOLD domain-containing protein.	0.958
SPPG_00380	SPPG_03982	A0A0L0HUU6	A0A0L0HHD1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CMGC/CDK/CDK7 protein kinase.	0.915
SPPG_00380	SPPG_04138	A0A0L0HUU6	A0A0L0HJH6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.948