47 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_02187	Proteasome subunit beta. (215 aa)
	SPPG_01913	MPN domain-containing protein. (318 aa)
	SPPG_01943	ANK_REP_REGION domain-containing protein. (212 aa)
	SPPG_02213	Proteasome subunit alpha type. (248 aa)
	SPPG_09008	Pr_beta_C domain-containing protein. (269 aa)
	SPPG_00984	PCI domain-containing protein. (515 aa)
	SPPG_01903	PCI domain-containing protein. (445 aa)
	SPPG_01482	PCI domain-containing protein. (421 aa)
	SPPG_00661	PCI domain-containing protein. (265 aa)
	SPPG_00743	PCI domain-containing protein. (383 aa)
	SPPG_00761	Proteasome subunit alpha type. (263 aa)
	SPPG_00492	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (336 aa)
	SPPG_00080	Proteasome subunit alpha type. (255 aa)
	SPPG_00083	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (182 aa)
	SPPG_01486	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (896 aa)
	SPPG_01427	Uncharacterized protein. (411 aa)
	SPPG_01459	Proteasome subunit alpha type. (252 aa)
	SPPG_08113	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (410 aa)
	SPPG_07775	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (163 aa)
	SPPG_08381	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (177 aa)
	SPPG_07578	Proteasome subunit beta. (276 aa)
	SPPG_07359	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (956 aa)
	SPPG_06943	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (445 aa)
	SPPG_07014	Uncharacterized protein. (268 aa)
	SPPG_06470	Uncharacterized protein. (528 aa)
	SPPG_06655	Uncharacterized protein. (1782 aa)
	SPPG_06601	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (434 aa)
	SPPG_06158	Uncharacterized protein. (203 aa)
	SPPG_06313	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (193 aa)
	SPPG_05887	26S protease regulatory subunit 6A-B; Belongs to the AAA ATPase family. (432 aa)
	SPPG_05378	26S proteasome non-ATPase regulatory subunit 14. (310 aa)
	SPPG_05514	Proteasome subunit beta; Belongs to the peptidase T1B family. (261 aa)
	SPPG_05606	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (181 aa)
	SPPG_05657	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (160 aa)
	SPPG_04725	Proteasome subunit beta. (194 aa)
	SPPG_04576	PA28_beta domain-containing protein. (206 aa)
	SPPG_03974	Proteasome subunit alpha type. (247 aa)
	SPPG_04653	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (185 aa)
	SPPG_04157	Proteasome subunit beta. (228 aa)
	SPPG_04313	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (394 aa)
	SPPG_04328	PCI domain-containing protein. (393 aa)
	SPPG_03155	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (395 aa)
	SPPG_03157	Uncharacterized protein. (259 aa)
	SPPG_03477	VWFA domain-containing protein. (356 aa)
	SPPG_02985	Proteasome subunit beta. (204 aa)
	SPPG_02784	Proteasome subunit alpha type. (252 aa)
	SPPG_02114	Proteasome subunit alpha type. (246 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00080	SPPG_00661	A0A0L0HTZ7	A0A0L0HVP6	Proteasome subunit alpha type.	PCI domain-containing protein.	0.997
SPPG_00080	SPPG_00743	A0A0L0HTZ7	A0A0L0HVF0	Proteasome subunit alpha type.	PCI domain-containing protein.	0.993
SPPG_00080	SPPG_00761	A0A0L0HTZ7	A0A0L0HUS4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
SPPG_00080	SPPG_00984	A0A0L0HTZ7	A0A0L0HRD1	Proteasome subunit alpha type.	PCI domain-containing protein.	0.818
SPPG_00080	SPPG_01427	A0A0L0HTZ7	A0A0L0HSX9	Proteasome subunit alpha type.	Uncharacterized protein.	0.836
SPPG_00080	SPPG_01459	A0A0L0HTZ7	A0A0L0HSG1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
SPPG_00080	SPPG_01482	A0A0L0HTZ7	A0A0L0HRN8	Proteasome subunit alpha type.	PCI domain-containing protein.	0.987
SPPG_00080	SPPG_01486	A0A0L0HTZ7	A0A0L0HT15	Proteasome subunit alpha type.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.991
SPPG_00080	SPPG_01903	A0A0L0HTZ7	A0A0L0HP03	Proteasome subunit alpha type.	PCI domain-containing protein.	0.995
SPPG_00080	SPPG_01913	A0A0L0HTZ7	A0A0L0HP47	Proteasome subunit alpha type.	MPN domain-containing protein.	0.996
SPPG_00080	SPPG_01943	A0A0L0HTZ7	A0A0L0HP77	Proteasome subunit alpha type.	ANK_REP_REGION domain-containing protein.	0.510
SPPG_00080	SPPG_02114	A0A0L0HTZ7	A0A0L0HNN9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
SPPG_00080	SPPG_02187	A0A0L0HTZ7	A0A0L0HNZ9	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
SPPG_00080	SPPG_02213	A0A0L0HTZ7	A0A0L0HQC1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
SPPG_00080	SPPG_02784	A0A0L0HTZ7	A0A0L0HNB8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
SPPG_00080	SPPG_02985	A0A0L0HTZ7	A0A0L0HM60	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
SPPG_00080	SPPG_03155	A0A0L0HTZ7	A0A0L0HJX9	Proteasome subunit alpha type.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.992
SPPG_00080	SPPG_03157	A0A0L0HTZ7	A0A0L0HKC3	Proteasome subunit alpha type.	Uncharacterized protein.	0.702
SPPG_00080	SPPG_03477	A0A0L0HTZ7	A0A0L0HKQ9	Proteasome subunit alpha type.	VWFA domain-containing protein.	0.998
SPPG_00080	SPPG_03974	A0A0L0HTZ7	A0A0L0HHC4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999