43 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_07768	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (157 aa)
	SPPG_00537	Uncharacterized protein. (473 aa)
	SPPG_00440	CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. (294 aa)
	SPPG_00075	Uncharacterized protein. (2548 aa)
	SPPG_01464	Myb-like domain-containing protein. (225 aa)
	SPPG_01158	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily. (343 aa)
	SPPG_02402	Abhydro_lipase domain-containing protein. (496 aa)
	SPPG_00990	Uncharacterized protein. (232 aa)
	SPPG_01223	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (911 aa)
	SPPG_01944	Abhydro_lipase domain-containing protein. (658 aa)
	SPPG_02389	SH3 domain-containing protein. (472 aa)
	SPPG_02096	Uncharacterized protein. (1168 aa)
	SPPG_01986	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (467 aa)
	SPPG_01925	Small GTP-binding protein domain. (192 aa)
	SPPG_02767	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (808 aa)
	SPPG_02727	Ncstrn_small domain-containing protein. (735 aa)
	SPPG_03613	Polyubiquitin. (243 aa)
	SPPG_03380	Uncharacterized protein. (741 aa)
	SPPG_03146	Uncharacterized protein. (144 aa)
	SPPG_03539	MYND-type domain-containing protein. (679 aa)
	SPPG_03954	Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (144 aa)
	SPPG_03091	Myocyte-specific enhancer factor 2C. (239 aa)
	SPPG_04768	STE/STE7 protein kinase; Belongs to the protein kinase superfamily. (371 aa)
	SPPG_04403	Uncharacterized protein. (579 aa)
	SPPG_04450	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1685 aa)
	SPPG_05994	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (549 aa)
	SPPG_05420	Uncharacterized protein. (311 aa)
	SPPG_05409	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	SPPG_06117	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (1105 aa)
	SPPG_06062	TKL/LISK/LISK-DD1 protein kinase. (477 aa)
	SPPG_06018	AGC protein kinase. (1457 aa)
	SPPG_06227	Polyubiquitin. (381 aa)
	SPPG_06083	ANK_REP_REGION domain-containing protein. (1187 aa)
	MED18	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
	SPPG_06782	Uncharacterized protein. (511 aa)
	SPPG_07754	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (737 aa)
	SPPG_09496	SH3 domain-containing protein. (278 aa)
	SPPG_08355	Uncharacterized protein. (3040 aa)
	SPPG_08324	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (139 aa)
	SPPG_08466	STE/STE7/MEK1 protein kinase. (364 aa)
	SPPG_08702	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (277 aa)
	SPPG_08047	CBFD_NFYB_HMF domain-containing protein. (124 aa)
	SPPG_08642	Calponin-homology (CH) domain-containing protein. (1047 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MED18	SPPG_03146	A0A0L0H950	A0A0L0HKH2	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Uncharacterized protein.	0.999
MED18	SPPG_03954	A0A0L0H950	A0A0L0HIY1	Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.996
SPPG_00075	SPPG_01158	A0A0L0HTZ3	A0A0L0HRJ5	Uncharacterized protein.	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily.	0.642
SPPG_00075	SPPG_01925	A0A0L0HTZ3	A0A0L0HN53	Uncharacterized protein.	Small GTP-binding protein domain.	0.642
SPPG_00075	SPPG_04768	A0A0L0HTZ3	A0A0L0HHW1	Uncharacterized protein.	STE/STE7 protein kinase; Belongs to the protein kinase superfamily.	0.642
SPPG_00075	SPPG_06018	A0A0L0HTZ3	A0A0L0HC11	Uncharacterized protein.	AGC protein kinase.	0.512
SPPG_00075	SPPG_06062	A0A0L0HTZ3	A0A0L0HC50	Uncharacterized protein.	TKL/LISK/LISK-DD1 protein kinase.	0.496
SPPG_00075	SPPG_07754	A0A0L0HTZ3	A0A0L0H7I4	Uncharacterized protein.	Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.	0.468
SPPG_00075	SPPG_08466	A0A0L0HTZ3	A0A0L0H5A8	Uncharacterized protein.	STE/STE7/MEK1 protein kinase.	0.642
SPPG_00440	SPPG_03539	A0A0L0HV36	A0A0L0HJV5	CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily.	MYND-type domain-containing protein.	0.459
SPPG_00440	SPPG_06018	A0A0L0HV36	A0A0L0HC11	CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily.	AGC protein kinase.	0.555
SPPG_00440	SPPG_06062	A0A0L0HV36	A0A0L0HC50	CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily.	TKL/LISK/LISK-DD1 protein kinase.	0.612
SPPG_00537	SPPG_01925	A0A0L0HVC8	A0A0L0HN53	Uncharacterized protein.	Small GTP-binding protein domain.	0.940
SPPG_00537	SPPG_04450	A0A0L0HVC8	A0A0L0HGA7	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.853
SPPG_00537	SPPG_06018	A0A0L0HVC8	A0A0L0HC11	Uncharacterized protein.	AGC protein kinase.	0.581
SPPG_00537	SPPG_06062	A0A0L0HVC8	A0A0L0HC50	Uncharacterized protein.	TKL/LISK/LISK-DD1 protein kinase.	0.545
SPPG_00537	SPPG_07768	A0A0L0HVC8	A0A0L0H8D2	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.437
SPPG_00537	SPPG_08324	A0A0L0HVC8	A0A0L0H5C9	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.483
SPPG_00537	SPPG_08702	A0A0L0HVC8	A0A0L0H4W2	Uncharacterized protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.712
SPPG_00990	SPPG_02727	A0A0L0HR13	A0A0L0HLD6	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.985