18 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_07955	CIA30 domain-containing protein. (202 aa)
	SPPG_06227	Polyubiquitin. (381 aa)
	SPPG_06470	Uncharacterized protein. (528 aa)
	SPPG_06203	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	SPPG_04640	Serine/threonine-protein phosphatase. (564 aa)
	SPPG_09194	Uncharacterized protein. (1275 aa)
	SPPG_04576	PA28_beta domain-containing protein. (206 aa)
	SPPG_03259	Calcineurin subunit B, variant 1. (175 aa)
	SPPG_03481	WD_REPEATS_REGION domain-containing protein. (357 aa)
	SPPG_03515	Uncharacterized protein. (1769 aa)
	SPPG_03613	Polyubiquitin. (243 aa)
	SPPG_01943	ANK_REP_REGION domain-containing protein. (212 aa)
	SPPG_01223	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (911 aa)
	SPPG_00943	Fe/B12 periplasmic-binding domain-containing protein. (319 aa)
	SPPG_01270	Uncharacterized protein. (1227 aa)
	SPPG_01636	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	SPPG_01427	Uncharacterized protein. (411 aa)
	SPPG_00254	KxDL domain-containing protein. (144 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00254	SPPG_01636	A0A0L0HT49	A0A0L0HSX0	KxDL domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.621
SPPG_00254	SPPG_03613	A0A0L0HT49	A0A0L0HL87	KxDL domain-containing protein.	Polyubiquitin.	0.618
SPPG_00254	SPPG_06203	A0A0L0HT49	A0A0L0HC43	KxDL domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.621
SPPG_00254	SPPG_06227	A0A0L0HT49	A0A0L0HAE3	KxDL domain-containing protein.	Polyubiquitin.	0.618
SPPG_00254	SPPG_07955	A0A0L0HT49	A0A0L0H6A8	KxDL domain-containing protein.	CIA30 domain-containing protein.	0.621
SPPG_00943	SPPG_04640	A0A0L0HR90	A0A0L0HFQ1	Fe/B12 periplasmic-binding domain-containing protein.	Serine/threonine-protein phosphatase.	0.558
SPPG_01223	SPPG_01636	A0A0L0HQV9	A0A0L0HSX0	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Ubiquitin-40S ribosomal protein S27a.	0.601
SPPG_01223	SPPG_03613	A0A0L0HQV9	A0A0L0HL87	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Polyubiquitin.	0.615
SPPG_01223	SPPG_06203	A0A0L0HQV9	A0A0L0HC43	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Ubiquitin-40S ribosomal protein S27a.	0.601
SPPG_01223	SPPG_06227	A0A0L0HQV9	A0A0L0HAE3	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	Polyubiquitin.	0.615
SPPG_01223	SPPG_07955	A0A0L0HQV9	A0A0L0H6A8	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	CIA30 domain-containing protein.	0.601
SPPG_01427	SPPG_01636	A0A0L0HSX9	A0A0L0HSX0	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.619
SPPG_01427	SPPG_03613	A0A0L0HSX9	A0A0L0HL87	Uncharacterized protein.	Polyubiquitin.	0.648
SPPG_01427	SPPG_04576	A0A0L0HSX9	A0A0L0HH86	Uncharacterized protein.	PA28_beta domain-containing protein.	0.661
SPPG_01427	SPPG_06203	A0A0L0HSX9	A0A0L0HC43	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.619
SPPG_01427	SPPG_06227	A0A0L0HSX9	A0A0L0HAE3	Uncharacterized protein.	Polyubiquitin.	0.648
SPPG_01427	SPPG_06470	A0A0L0HSX9	A0A0L0HAR5	Uncharacterized protein.	Uncharacterized protein.	0.703
SPPG_01427	SPPG_07955	A0A0L0HSX9	A0A0L0H6A8	Uncharacterized protein.	CIA30 domain-containing protein.	0.619
SPPG_01636	SPPG_00254	A0A0L0HSX0	A0A0L0HT49	Ubiquitin-40S ribosomal protein S27a.	KxDL domain-containing protein.	0.621
SPPG_01636	SPPG_01223	A0A0L0HSX0	A0A0L0HQV9	Ubiquitin-40S ribosomal protein S27a.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.601