19 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_01653	ULK/ULK protein kinase. (1109 aa)
	SPPG_01881	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (328 aa)
	SPPG_01873	Uncharacterized protein. (626 aa)
	SPPG_02843	CMGC/CK2 protein kinase. (335 aa)
	SPPG_03613	Polyubiquitin. (243 aa)
	SPPG_03192	SET domain-containing protein. (576 aa)
	SPPG_04867	Uncharacterized protein. (391 aa)
	SPPG_06082	CMGC/CK2 protein kinase. (343 aa)
	SPPG_05542	Uncharacterized protein. (265 aa)
	MDM34	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10. (679 aa)
	SPPG_08673	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (297 aa)
	SPPG_07236	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (148 aa)
	SPPG_07265	CMGC/CK2 protein kinase, variant; Belongs to the protein kinase superfamily. (394 aa)
	SPPG_06227	Polyubiquitin. (381 aa)
	SPPG_00347	Uncharacterized protein. (151 aa)
	SPPG_00505	Uncharacterized protein. (158 aa)
	SPPG_00426	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (803 aa)
	SPPG_08696	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (227 aa)
	SPPG_00116	Autophagy-related protein. (120 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MDM34	SPPG_00426	A0A0L0HG62	A0A0L0HUF5	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.632
MDM34	SPPG_01881	A0A0L0HG62	A0A0L0HPA6	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.838
MDM34	SPPG_03192	A0A0L0HG62	A0A0L0HKF8	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.	SET domain-containing protein.	0.442
MDM34	SPPG_08696	A0A0L0HG62	A0A0L0H4P4	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.838
SPPG_00116	SPPG_00347	A0A0L0HTZ5	A0A0L0HUR6	Autophagy-related protein.	Uncharacterized protein.	0.849
SPPG_00116	SPPG_00426	A0A0L0HTZ5	A0A0L0HUF5	Autophagy-related protein.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.768
SPPG_00116	SPPG_01653	A0A0L0HTZ5	A0A0L0HS88	Autophagy-related protein.	ULK/ULK protein kinase.	0.996
SPPG_00116	SPPG_03192	A0A0L0HTZ5	A0A0L0HKF8	Autophagy-related protein.	SET domain-containing protein.	0.442
SPPG_00116	SPPG_03613	A0A0L0HTZ5	A0A0L0HL87	Autophagy-related protein.	Polyubiquitin.	0.741
SPPG_00116	SPPG_05542	A0A0L0HTZ5	A0A0L0HEU6	Autophagy-related protein.	Uncharacterized protein.	0.894
SPPG_00116	SPPG_06227	A0A0L0HTZ5	A0A0L0HAE3	Autophagy-related protein.	Polyubiquitin.	0.741
SPPG_00116	SPPG_07236	A0A0L0HTZ5	A0A0L0H7V2	Autophagy-related protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.950
SPPG_00116	SPPG_08673	A0A0L0HTZ5	A0A0L0H4S6	Autophagy-related protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.940
SPPG_00347	SPPG_00116	A0A0L0HUR6	A0A0L0HTZ5	Uncharacterized protein.	Autophagy-related protein.	0.849
SPPG_00347	SPPG_01653	A0A0L0HUR6	A0A0L0HS88	Uncharacterized protein.	ULK/ULK protein kinase.	0.663
SPPG_00347	SPPG_07236	A0A0L0HUR6	A0A0L0H7V2	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.640
SPPG_00347	SPPG_08673	A0A0L0HUR6	A0A0L0H4S6	Uncharacterized protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.642
SPPG_00426	MDM34	A0A0L0HUF5	A0A0L0HG62	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.	0.632
SPPG_00426	SPPG_00116	A0A0L0HUF5	A0A0L0HTZ5	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Autophagy-related protein.	0.768
SPPG_00426	SPPG_00505	A0A0L0HUF5	A0A0L0HUK6	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.460