52 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_03500	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	SPPG_00835	Uncharacterized protein. (1035 aa)
	SPPG_00206	Uncharacterized protein. (1122 aa)
	SPPG_00075	Uncharacterized protein. (2548 aa)
	SPPG_00045	Uncharacterized protein. (183 aa)
	SPPG_00259	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (429 aa)
	SPPG_00254	KxDL domain-containing protein. (144 aa)
	SPPG_01432	Uncharacterized protein. (153 aa)
	SPPG_01427	Uncharacterized protein. (411 aa)
	SPPG_01636	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	SPPG_01591	Uncharacterized protein. (287 aa)
	SPPG_01158	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily. (343 aa)
	SPPG_00870	Tyrosine-protein phosphatase domain-containing protein. (479 aa)
	SPPG_01943	ANK_REP_REGION domain-containing protein. (212 aa)
	SPPG_02041	GMP_PDE_delta domain-containing protein. (143 aa)
	SPPG_01877	Uncharacterized protein. (210 aa)
	SPPG_02820	Uncharacterized protein. (751 aa)
	SPPG_03613	Polyubiquitin. (243 aa)
	SPPG_04278	Uncharacterized protein. (357 aa)
	SPPG_03188	Uncharacterized protein. (807 aa)
	SPPG_03810	Uncharacterized protein. (300 aa)
	SPPG_03801	Uncharacterized protein. (863 aa)
	SPPG_04768	STE/STE7 protein kinase; Belongs to the protein kinase superfamily. (371 aa)
	SPPG_03749	Uncharacterized protein. (941 aa)
	SPPG_05288	Uncharacterized protein. (1218 aa)
	SPPG_09269	Uncharacterized protein. (1088 aa)
	SPPG_05114	Abhydrolase_2 domain-containing protein. (224 aa)
	SPPG_04468	Robl_LC7 domain-containing protein. (133 aa)
	SPPG_04395	Uncharacterized protein. (254 aa)
	SPPG_04993	CaMKII_AD domain-containing protein. (170 aa)
	SPPG_05804	Uncharacterized protein. (1051 aa)
	SPPG_06041	Uncharacterized protein. (296 aa)
	SPPG_05758	WD_REPEATS_REGION domain-containing protein. (306 aa)
	SPPG_06316	Uncharacterized protein. (1058 aa)
	SPPG_06234	Abhydrolase_2 domain-containing protein. (274 aa)
	SPPG_06203	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	SPPG_05870	Uncharacterized protein. (1199 aa)
	SPPG_06162	Uncharacterized protein. (328 aa)
	SPPG_06470	Uncharacterized protein. (528 aa)
	SPPG_06632	Uncharacterized protein. (120 aa)
	SPPG_06227	Polyubiquitin. (381 aa)
	SPPG_06732	Ras-GAP domain-containing protein. (2107 aa)
	SPPG_06718	Uncharacterized protein. (254 aa)
	SPPG_07424	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (419 aa)
	SPPG_07875	Uncharacterized protein. (168 aa)
	SPPG_07955	CIA30 domain-containing protein. (202 aa)
	SPPG_08355	Uncharacterized protein. (3040 aa)
	SPPG_08345	Uncharacterized protein. (325 aa)
	SPPG_08466	STE/STE7/MEK1 protein kinase. (364 aa)
	SPPG_08635	Uncharacterized protein. (301 aa)
	SPPG_08642	Calponin-homology (CH) domain-containing protein. (1047 aa)
	SPPG_09561	Prohibitin. (277 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00045	SPPG_01158	A0A0L0HTW7	A0A0L0HRJ5	Uncharacterized protein.	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily.	0.595
SPPG_00045	SPPG_04768	A0A0L0HTW7	A0A0L0HHW1	Uncharacterized protein.	STE/STE7 protein kinase; Belongs to the protein kinase superfamily.	0.595
SPPG_00045	SPPG_05804	A0A0L0HTW7	A0A0L0HDJ9	Uncharacterized protein.	Uncharacterized protein.	0.563
SPPG_00045	SPPG_08466	A0A0L0HTW7	A0A0L0H5A8	Uncharacterized protein.	STE/STE7/MEK1 protein kinase.	0.595
SPPG_00075	SPPG_01158	A0A0L0HTZ3	A0A0L0HRJ5	Uncharacterized protein.	STE/STE7/MEK1 protein kinase; Belongs to the protein kinase superfamily.	0.642
SPPG_00075	SPPG_03801	A0A0L0HTZ3	A0A0L0HHW5	Uncharacterized protein.	Uncharacterized protein.	0.999
SPPG_00075	SPPG_04768	A0A0L0HTZ3	A0A0L0HHW1	Uncharacterized protein.	STE/STE7 protein kinase; Belongs to the protein kinase superfamily.	0.642
SPPG_00075	SPPG_05804	A0A0L0HTZ3	A0A0L0HDJ9	Uncharacterized protein.	Uncharacterized protein.	0.931
SPPG_00075	SPPG_08466	A0A0L0HTZ3	A0A0L0H5A8	Uncharacterized protein.	STE/STE7/MEK1 protein kinase.	0.642
SPPG_00206	SPPG_01636	A0A0L0HUD0	A0A0L0HSX0	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.619
SPPG_00206	SPPG_03613	A0A0L0HUD0	A0A0L0HL87	Uncharacterized protein.	Polyubiquitin.	0.620
SPPG_00206	SPPG_05804	A0A0L0HUD0	A0A0L0HDJ9	Uncharacterized protein.	Uncharacterized protein.	0.826
SPPG_00206	SPPG_06203	A0A0L0HUD0	A0A0L0HC43	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.619
SPPG_00206	SPPG_06227	A0A0L0HUD0	A0A0L0HAE3	Uncharacterized protein.	Polyubiquitin.	0.620
SPPG_00206	SPPG_07955	A0A0L0HUD0	A0A0L0H6A8	Uncharacterized protein.	CIA30 domain-containing protein.	0.619
SPPG_00254	SPPG_01636	A0A0L0HT49	A0A0L0HSX0	KxDL domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.621
SPPG_00254	SPPG_03613	A0A0L0HT49	A0A0L0HL87	KxDL domain-containing protein.	Polyubiquitin.	0.618
SPPG_00254	SPPG_06203	A0A0L0HT49	A0A0L0HC43	KxDL domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.621
SPPG_00254	SPPG_06227	A0A0L0HT49	A0A0L0HAE3	KxDL domain-containing protein.	Polyubiquitin.	0.618
SPPG_00254	SPPG_07955	A0A0L0HT49	A0A0L0H6A8	KxDL domain-containing protein.	CIA30 domain-containing protein.	0.621