STRINGSTRING
SPPG_06894 SPPG_06894 SPPG_00774 SPPG_00774 SPPG_00731 SPPG_00731 SPPG_00518 SPPG_00518 SPPG_00380 SPPG_00380 SPPG_00548 SPPG_00548 SPPG_00510 SPPG_00510 SPPG_00516 SPPG_00516 SPPG_00223 SPPG_00223 SPPG_00345 SPPG_00345 SPPG_01512 SPPG_01512 SPPG_01655 SPPG_01655 SPPG_01488 SPPG_01488 SPPG_01151 SPPG_01151 SPPG_00881 SPPG_00881 SPPG_08432 SPPG_08432 SPPG_08799 SPPG_08799 SPPG_08550 SPPG_08550 SPPG_08118 SPPG_08118 SPPG_08235 SPPG_08235 SPPG_07472 SPPG_07472 SPPG_09468 SPPG_09468 SPPG_07298 SPPG_07298 SPPG_07395 SPPG_07395 SPPG_06733 SPPG_06733 SPPG_07183 SPPG_07183 SPPG_06988 SPPG_06988 SPPG_06255 SPPG_06255 SPPG_05960 SPPG_05960 SPPG_06261 SPPG_06261 SPPG_05862 SPPG_05862 SPPG_05560 SPPG_05560 SPPG_05912 SPPG_05912 SPPG_05569 SPPG_05569 SPPG_05568 SPPG_05568 SPPG_05237 SPPG_05237 SPPG_04720 SPPG_04720 SPPG_04485 SPPG_04485 SPPG_03982 SPPG_03982 SPPG_03998 SPPG_03998 SPPG_09152 SPPG_09152 SPPG_09096 SPPG_09096 SPPG_09161 SPPG_09161 SPPG_04138 SPPG_04138 SPPG_03408 SPPG_03408 SPPG_03514 SPPG_03514 SPPG_09181 SPPG_09181 SPPG_03285 SPPG_03285 SPPG_04220 SPPG_04220 SPPG_03220 SPPG_03220 SPPG_03497 SPPG_03497 SPPG_02356 SPPG_02356 SPPG_02265 SPPG_02265 SPPG_00970 SPPG_00970 SPPG_01883 SPPG_01883 SPPG_02946 SPPG_02946 SPPG_03008 SPPG_03008 SPPG_03016 SPPG_03016 SPPG_03001 SPPG_03001 SPPG_01784 SPPG_01784 SPPG_02666 SPPG_02666 SPPG_03475 SPPG_03475 SPPG_09110 SPPG_09110 SPPG_03559 SPPG_03559 SPPG_03502 SPPG_03502
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPPG_06894Uncharacterized protein. (1023 aa)
SPPG_00774Uncharacterized protein. (145 aa)
SPPG_00731Uncharacterized protein. (330 aa)
SPPG_00518CDK-activating kinase assembly factor MAT1. (309 aa)
SPPG_00380DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1799 aa)
SPPG_00548Transcription factor tfb4. (288 aa)
SPPG_00510RPOL4c domain-containing protein. (180 aa)
SPPG_00516Nuclear cap-binding protein subunit 2. (221 aa)
SPPG_00223TPR_REGION domain-containing protein. (1144 aa)
SPPG_00345Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (259 aa)
SPPG_01512RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (477 aa)
SPPG_01655Uncharacterized protein. (898 aa)
SPPG_01488CDC73_C domain-containing protein. (423 aa)
SPPG_01151Uncharacterized protein. (621 aa)
SPPG_00881FCP1 homology domain-containing protein. (592 aa)
SPPG_08432Cyclin N-terminal domain-containing protein. (421 aa)
SPPG_08799WD_REPEATS_REGION domain-containing protein. (91 aa)
SPPG_08550Cyclin ccl1; Belongs to the cyclin family. (354 aa)
SPPG_08118BTB domain-containing protein. (568 aa)
SPPG_08235RNA_pol_L_2 domain-containing protein. (133 aa)
SPPG_07472TAFII28 domain-containing protein. (190 aa)
SPPG_09468DNA repair helicase rad25. (934 aa)
SPPG_07298Uncharacterized protein. (300 aa)
SPPG_07395BSD domain-containing protein. (548 aa)
SPPG_06733Uncharacterized protein. (640 aa)
SPPG_07183HTH TFE/IIEalpha-type domain-containing protein. (206 aa)
SPPG_06988BTP domain-containing protein. (328 aa)
SPPG_06255General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (432 aa)
SPPG_05960Peptidase_M1 domain-containing protein. (1027 aa)
SPPG_06261TFIID_20kDa domain-containing protein. (386 aa)
SPPG_05862Uncharacterized protein. (1005 aa)
SPPG_05560TFIIS N-terminal domain-containing protein. (370 aa)
SPPG_05912Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
SPPG_05569DUF3591 domain-containing protein. (805 aa)
SPPG_05568Bromo domain-containing protein. (367 aa)
SPPG_05237WD_REPEATS_REGION domain-containing protein. (658 aa)
SPPG_04720Uncharacterized protein. (101 aa)
SPPG_04485Ubiquitin-like domain-containing protein. (123 aa)
SPPG_03982CMGC/CDK/CDK7 protein kinase. (353 aa)
SPPG_03998Uncharacterized protein. (294 aa)
SPPG_09152Uncharacterized protein. (256 aa)
SPPG_09096TAF domain-containing protein. (448 aa)
SPPG_09161Uncharacterized protein. (431 aa)
SPPG_04138Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa)
SPPG_03408Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (905 aa)
SPPG_03514Plus3 domain-containing protein. (500 aa)
SPPG_09181DNA repair helicase (Rad3). (1252 aa)
SPPG_03285TATA-box-binding protein. (201 aa)
SPPG_04220Uncharacterized protein. (358 aa)
SPPG_03220Uncharacterized protein. (178 aa)
SPPG_03497Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (203 aa)
SPPG_02356DNA repair helicase rad25. (827 aa)
SPPG_02265Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (998 aa)
SPPG_00970Uncharacterized protein. (445 aa)
SPPG_01883TFIIB-type domain-containing protein. (330 aa)
SPPG_02946Uncharacterized protein. (1557 aa)
SPPG_03008TAF4 domain-containing protein. (720 aa)
SPPG_03016DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
SPPG_03001MIF4G domain-containing protein. (838 aa)
SPPG_01784TFIID_20kDa domain-containing protein. (709 aa)
SPPG_02666RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (709 aa)
SPPG_03475RPOLD domain-containing protein. (289 aa)
SPPG_09110Uncharacterized protein. (208 aa)
SPPG_03559TAFII55_N domain-containing protein. (364 aa)
SPPG_03502FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (722 aa)
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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