45 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_03982	CMGC/CDK/CDK7 protein kinase. (353 aa)
	SPPG_08799	WD_REPEATS_REGION domain-containing protein. (91 aa)
	SPPG_08550	Cyclin ccl1; Belongs to the cyclin family. (354 aa)
	SPPG_08118	BTB domain-containing protein. (568 aa)
	SPPG_08235	RNA_pol_L_2 domain-containing protein. (133 aa)
	SPPG_07472	TAFII28 domain-containing protein. (190 aa)
	SPPG_09468	DNA repair helicase rad25. (934 aa)
	SPPG_07298	Uncharacterized protein. (300 aa)
	SPPG_07395	BSD domain-containing protein. (548 aa)
	SPPG_06733	Uncharacterized protein. (640 aa)
	SPPG_07183	HTH TFE/IIEalpha-type domain-containing protein. (206 aa)
	SPPG_06988	BTP domain-containing protein. (328 aa)
	SPPG_06255	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (432 aa)
	SPPG_05960	Peptidase_M1 domain-containing protein. (1027 aa)
	SPPG_06261	TFIID_20kDa domain-containing protein. (386 aa)
	SPPG_05912	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	SPPG_05569	DUF3591 domain-containing protein. (805 aa)
	SPPG_05568	Bromo domain-containing protein. (367 aa)
	SPPG_05237	WD_REPEATS_REGION domain-containing protein. (658 aa)
	SPPG_04720	Uncharacterized protein. (101 aa)
	SPPG_09152	Uncharacterized protein. (256 aa)
	SPPG_09096	TAF domain-containing protein. (448 aa)
	SPPG_03408	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (905 aa)
	SPPG_09181	DNA repair helicase (Rad3). (1252 aa)
	SPPG_03220	Uncharacterized protein. (178 aa)
	SPPG_03497	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (203 aa)
	SPPG_03285	TATA-box-binding protein. (201 aa)
	SPPG_03559	TAFII55_N domain-containing protein. (364 aa)
	SPPG_09110	Uncharacterized protein. (208 aa)
	SPPG_03475	RPOLD domain-containing protein. (289 aa)
	SPPG_01784	TFIID_20kDa domain-containing protein. (709 aa)
	SPPG_03016	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
	SPPG_03008	TAF4 domain-containing protein. (720 aa)
	SPPG_01883	TFIIB-type domain-containing protein. (330 aa)
	SPPG_02356	DNA repair helicase rad25. (827 aa)
	SPPG_01151	Uncharacterized protein. (621 aa)
	SPPG_01655	Uncharacterized protein. (898 aa)
	SPPG_01512	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (477 aa)
	SPPG_00345	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (259 aa)
	SPPG_00510	RPOL4c domain-containing protein. (180 aa)
	SPPG_00548	Transcription factor tfb4. (288 aa)
	SPPG_00380	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1799 aa)
	SPPG_00518	CDK-activating kinase assembly factor MAT1. (309 aa)
	SPPG_00731	Uncharacterized protein. (330 aa)
	SPPG_00774	Uncharacterized protein. (145 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00345	SPPG_00380	A0A0L0HU53	A0A0L0HUU6	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.816
SPPG_00345	SPPG_00510	A0A0L0HU53	A0A0L0HUM9	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RPOL4c domain-containing protein.	0.961
SPPG_00345	SPPG_00518	A0A0L0HU53	A0A0L0HV92	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	CDK-activating kinase assembly factor MAT1.	0.995
SPPG_00345	SPPG_00548	A0A0L0HU53	A0A0L0HUP0	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription factor tfb4.	0.993
SPPG_00345	SPPG_00731	A0A0L0HU53	A0A0L0HVX9	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.991
SPPG_00345	SPPG_00774	A0A0L0HU53	A0A0L0HW29	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.960
SPPG_00345	SPPG_01151	A0A0L0HU53	A0A0L0HS56	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.990
SPPG_00345	SPPG_01512	A0A0L0HU53	A0A0L0HT65	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.992
SPPG_00345	SPPG_01655	A0A0L0HU53	A0A0L0HSY8	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.816
SPPG_00345	SPPG_01784	A0A0L0HU53	A0A0L0HMP7	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	TFIID_20kDa domain-containing protein.	0.850
SPPG_00345	SPPG_01883	A0A0L0HU53	A0A0L0HNY3	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	TFIIB-type domain-containing protein.	0.984
SPPG_00345	SPPG_02356	A0A0L0HU53	A0A0L0HQG7	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	DNA repair helicase rad25.	0.943
SPPG_00345	SPPG_03008	A0A0L0HU53	A0A0L0HNM6	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	TAF4 domain-containing protein.	0.909
SPPG_00345	SPPG_03016	A0A0L0HU53	A0A0L0HNB5	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.957
SPPG_00345	SPPG_03220	A0A0L0HU53	A0A0L0HKP8	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.961
SPPG_00345	SPPG_03285	A0A0L0HU53	A0A0L0HKX1	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	TATA-box-binding protein.	0.927
SPPG_00345	SPPG_03408	A0A0L0HU53	A0A0L0HJI2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.975
SPPG_00345	SPPG_03475	A0A0L0HU53	A0A0L0HLA9	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RPOLD domain-containing protein.	0.968
SPPG_00345	SPPG_03497	A0A0L0HU53	A0A0L0HKS7	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]	0.855
SPPG_00345	SPPG_03559	A0A0L0HU53	A0A0L0HL38	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	TAFII55_N domain-containing protein.	0.887