40 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_03613	Polyubiquitin. (243 aa)
	SPPG_00395	ENTH domain-containing protein. (663 aa)
	SPPG_00177	ENTH domain-containing protein. (489 aa)
	SPPG_00254	KxDL domain-containing protein. (144 aa)
	SPPG_01457	CSN8_PSD8_EIF3K domain-containing protein. (219 aa)
	SPPG_01636	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	SPPG_01231	Uncharacterized protein. (411 aa)
	SPPG_02374	Uncharacterized protein. (318 aa)
	SPPG_01223	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (911 aa)
	SPPG_02310	PCI domain-containing protein. (268 aa)
	SPPG_02389	SH3 domain-containing protein. (472 aa)
	SPPG_01745	Uncharacterized protein; Belongs to the synaptobrevin family. (234 aa)
	SPPG_01986	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (467 aa)
	SPPG_02767	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (808 aa)
	SPPG_02521	SH3 domain-containing protein. (257 aa)
	SPPG_09125	NEDD8 protein. (78 aa)
	SPPG_04152	C2 domain-containing protein. (423 aa)
	SPPG_04308	ATP-dependent chaperone ClpB; Belongs to the ClpA/ClpB family. (846 aa)
	SPPG_04145	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (765 aa)
	SPPG_03765	V-SNARE coiled-coil homology domain-containing protein. (96 aa)
	SPPG_03915	Uncharacterized protein. (337 aa)
	SPPG_05212	NAK/BIKE protein kinase. (779 aa)
	SPPG_05704	Uncharacterized protein. (743 aa)
	SPPG_05538	MPN domain-containing protein. (320 aa)
	SPPG_05028	V-SNARE coiled-coil homology domain-containing protein. (128 aa)
	SPPG_05409	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	SPPG_05385	ENTH domain-containing protein. (666 aa)
	SPPG_05828	DUF1681 domain-containing protein. (252 aa)
	SPPG_05367	PCI domain-containing protein. (447 aa)
	SPPG_05496	ATP-dependent chaperone ClpB; Belongs to the ClpA/ClpB family. (889 aa)
	SPPG_06117	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (1105 aa)
	SPPG_06203	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	SPPG_06120	V-SNARE coiled-coil homology domain-containing protein. (103 aa)
	SPPG_06558	MHD domain-containing protein. (705 aa)
	SPPG_06227	Polyubiquitin. (381 aa)
	SPPG_06801	Uncharacterized protein. (350 aa)
	SPPG_06992	PCI domain-containing protein. (443 aa)
	SPPG_07456	Uncharacterized protein. (2024 aa)
	SPPG_09496	SH3 domain-containing protein. (278 aa)
	SPPG_07955	CIA30 domain-containing protein. (202 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00177	SPPG_00395	A0A0L0HTK9	A0A0L0HUC4	ENTH domain-containing protein.	ENTH domain-containing protein.	0.765
SPPG_00177	SPPG_01223	A0A0L0HTK9	A0A0L0HQV9	ENTH domain-containing protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.627
SPPG_00177	SPPG_01231	A0A0L0HTK9	A0A0L0HSE5	ENTH domain-containing protein.	Uncharacterized protein.	0.708
SPPG_00177	SPPG_01636	A0A0L0HTK9	A0A0L0HSX0	ENTH domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.681
SPPG_00177	SPPG_01745	A0A0L0HTK9	A0A0L0HPD8	ENTH domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.592
SPPG_00177	SPPG_01986	A0A0L0HTK9	A0A0L0HNA8	ENTH domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.758
SPPG_00177	SPPG_02374	A0A0L0HTK9	A0A0L0HR40	ENTH domain-containing protein.	Uncharacterized protein.	0.653
SPPG_00177	SPPG_02521	A0A0L0HTK9	A0A0L0HLM4	ENTH domain-containing protein.	SH3 domain-containing protein.	0.555
SPPG_00177	SPPG_02767	A0A0L0HTK9	A0A0L0HMF7	ENTH domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.722
SPPG_00177	SPPG_03613	A0A0L0HTK9	A0A0L0HL87	ENTH domain-containing protein.	Polyubiquitin.	0.728
SPPG_00177	SPPG_03765	A0A0L0HTK9	A0A0L0HII6	ENTH domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.544
SPPG_00177	SPPG_04145	A0A0L0HTK9	A0A0L0HJ48	ENTH domain-containing protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.737
SPPG_00177	SPPG_05028	A0A0L0HTK9	A0A0L0HDX0	ENTH domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.544
SPPG_00177	SPPG_05212	A0A0L0HTK9	A0A0L0HG94	ENTH domain-containing protein.	NAK/BIKE protein kinase.	0.590
SPPG_00177	SPPG_05385	A0A0L0HTK9	A0A0L0HDN9	ENTH domain-containing protein.	ENTH domain-containing protein.	0.757
SPPG_00177	SPPG_05409	A0A0L0HTK9	A0A0L0HDR2	ENTH domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.651
SPPG_00177	SPPG_05828	A0A0L0HTK9	A0A0L0HDL9	ENTH domain-containing protein.	DUF1681 domain-containing protein.	0.669
SPPG_00177	SPPG_06117	A0A0L0HTK9	A0A0L0HCB5	ENTH domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.722
SPPG_00177	SPPG_06120	A0A0L0HTK9	A0A0L0HBV3	ENTH domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.544
SPPG_00177	SPPG_06203	A0A0L0HTK9	A0A0L0HC43	ENTH domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.681