5 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_01959	Uncharacterized protein. (721 aa)
	SPPG_08373	Divalent anion:Na+ symporter (DASS) family transporter. (697 aa)
	SPPG_05227	Uncharacterized protein. (1097 aa)
	SPPG_01814	Uncharacterized protein. (528 aa)
	SPPG_00987	Uncharacterized protein. (1053 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00987	SPPG_01959	A0A0L0HR07	A0A0L0HP93	Uncharacterized protein.	Uncharacterized protein.	0.908
SPPG_00987	SPPG_05227	A0A0L0HR07	A0A0L0HFZ5	Uncharacterized protein.	Uncharacterized protein.	0.951
SPPG_00987	SPPG_08373	A0A0L0HR07	A0A0L0H409	Uncharacterized protein.	Divalent anion:Na+ symporter (DASS) family transporter.	0.599
SPPG_01959	SPPG_00987	A0A0L0HP93	A0A0L0HR07	Uncharacterized protein.	Uncharacterized protein.	0.908
SPPG_01959	SPPG_05227	A0A0L0HP93	A0A0L0HFZ5	Uncharacterized protein.	Uncharacterized protein.	0.861
SPPG_05227	SPPG_00987	A0A0L0HFZ5	A0A0L0HR07	Uncharacterized protein.	Uncharacterized protein.	0.951
SPPG_05227	SPPG_01959	A0A0L0HFZ5	A0A0L0HP93	Uncharacterized protein.	Uncharacterized protein.	0.861
SPPG_05227	SPPG_08373	A0A0L0HFZ5	A0A0L0H409	Uncharacterized protein.	Divalent anion:Na+ symporter (DASS) family transporter.	0.627
SPPG_08373	SPPG_00987	A0A0L0H409	A0A0L0HR07	Divalent anion:Na+ symporter (DASS) family transporter.	Uncharacterized protein.	0.599
SPPG_08373	SPPG_05227	A0A0L0H409	A0A0L0HFZ5	Divalent anion:Na+ symporter (DASS) family transporter.	Uncharacterized protein.	0.627