26 items (Spizellomyces punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPPG_04280	Uncharacterized protein. (316 aa)
	SPPG_03697	Uncharacterized protein. (199 aa)
	SPPG_02791	Uncharacterized protein. (111 aa)
	SPPG_02487	Uncharacterized protein. (105 aa)
	SPPG_02481	SRP54 domain-containing protein. (616 aa)
	SPPG_01887	YidC/Oxa1 family membrane protein insertase. (440 aa)
	SPPG_03030	Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. (70 aa)
	SPPG_08416	SRP9-21 domain-containing protein. (118 aa)
	SPPG_08690	Uncharacterized protein. (253 aa)
	SPPG_02839	Signal peptidase complex catalytic subunit SEC11. (187 aa)
	SPPG_05932	Protein yippee-like; Belongs to the yippee family. (115 aa)
	SPPG_09002	Signal peptidase subunit 3. (181 aa)
	SPPG_08982	Peptidase_S24 domain-containing protein. (176 aa)
	SPPG_06609	Uncharacterized protein. (216 aa)
	SPPG_07243	Mitochondrial inner membrane protease subunit. (203 aa)
	SPPG_09277	Protein yippee-like; Belongs to the yippee family. (112 aa)
	SPPG_01095	Protein transporter Sec61 subunit alpha isoform 2. (472 aa)
	SPPG_01588	Protein yippee-like; Belongs to the yippee family. (115 aa)
	SPPG_00071	Signal peptidase complex catalytic subunit SEC11. (176 aa)
	SPPG_00716	J domain-containing protein. (664 aa)
	SPPG_00857	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (641 aa)
	SPPG_05512	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (661 aa)
	SPPG_05531	Chaperone DnaK; Belongs to the heat shock protein 70 family. (746 aa)
	SPPG_04953	Sec62 family protein translocation protein. (250 aa)
	SPPG_04695	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (529 aa)
	SPPG_03808	Uncharacterized protein. (186 aa)

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_00071	SPPG_00716	A0A0L0HTW1	A0A0L0HUK3	Signal peptidase complex catalytic subunit SEC11.	J domain-containing protein.	0.429
SPPG_00071	SPPG_02487	A0A0L0HTW1	A0A0L0HM37	Signal peptidase complex catalytic subunit SEC11.	Uncharacterized protein.	0.960
SPPG_00071	SPPG_06609	A0A0L0HTW1	A0A0L0HBH1	Signal peptidase complex catalytic subunit SEC11.	Uncharacterized protein.	0.968
SPPG_00071	SPPG_09002	A0A0L0HTW1	A0A0L0HP32	Signal peptidase complex catalytic subunit SEC11.	Signal peptidase subunit 3.	0.957
SPPG_00716	SPPG_00071	A0A0L0HUK3	A0A0L0HTW1	J domain-containing protein.	Signal peptidase complex catalytic subunit SEC11.	0.429
SPPG_00716	SPPG_00857	A0A0L0HUK3	A0A0L0HVT2	J domain-containing protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.568
SPPG_00716	SPPG_01095	A0A0L0HUK3	A0A0L0HRZ1	J domain-containing protein.	Protein transporter Sec61 subunit alpha isoform 2.	0.996
SPPG_00716	SPPG_02481	A0A0L0HUK3	A0A0L0HMC2	J domain-containing protein.	SRP54 domain-containing protein.	0.718
SPPG_00716	SPPG_02487	A0A0L0HUK3	A0A0L0HM37	J domain-containing protein.	Uncharacterized protein.	0.608
SPPG_00716	SPPG_02791	A0A0L0HUK3	A0A0L0HLK7	J domain-containing protein.	Uncharacterized protein.	0.585
SPPG_00716	SPPG_02839	A0A0L0HUK3	A0A0L0HNH0	J domain-containing protein.	Signal peptidase complex catalytic subunit SEC11.	0.429
SPPG_00716	SPPG_03030	A0A0L0HUK3	A0A0L0HNF9	J domain-containing protein.	Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic.	0.994
SPPG_00716	SPPG_03697	A0A0L0HUK3	A0A0L0HLH3	J domain-containing protein.	Uncharacterized protein.	0.536
SPPG_00716	SPPG_03808	A0A0L0HUK3	A0A0L0HGV0	J domain-containing protein.	Uncharacterized protein.	0.994
SPPG_00716	SPPG_04695	A0A0L0HUK3	A0A0L0HFV5	J domain-containing protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.538
SPPG_00716	SPPG_04953	A0A0L0HUK3	A0A0L0HF73	J domain-containing protein.	Sec62 family protein translocation protein.	0.998
SPPG_00716	SPPG_05512	A0A0L0HUK3	A0A0L0HDQ4	J domain-containing protein.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.660
SPPG_00716	SPPG_05531	A0A0L0HUK3	A0A0L0HE34	J domain-containing protein.	Chaperone DnaK; Belongs to the heat shock protein 70 family.	0.961
SPPG_00716	SPPG_06609	A0A0L0HUK3	A0A0L0HBH1	J domain-containing protein.	Uncharacterized protein.	0.683
SPPG_00716	SPPG_08416	A0A0L0HUK3	A0A0L0H450	J domain-containing protein.	SRP9-21 domain-containing protein.	0.533