71 items (Lobosporangium transversale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y2GJD0	G domain-containing protein. (749 aa)
	A0A1Y2GJ97	40S ribosomal protein S27. (94 aa)
	A0A1Y2GIG8	Ribosomal RNA-processing protein 7-domain-containing protein. (324 aa)
	A0A1Y2GI24	Ribosomal protein L10e/L16. (218 aa)
	A0A1Y2GHA0	Mitochondrial glyco protein. (225 aa)
	A0A1Y2GFC7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4053 aa)
	A0A1Y2GEI3	Centromere-associated protein K-domain-containing protein. (340 aa)
	A0A1Y2GDW2	Ribonuclease H-like domain-containing protein. (347 aa)
	A0A1Y2GDI8	Inositol phospholipid synthesis and fat-storage-inducing TM-domain-containing protein. (373 aa)
	A0A1Y2GDB6	Tr-type G domain-containing protein. (1115 aa)
	A0A1Y2GCT7	Uncharacterized protein. (283 aa)
	A0A1Y2G817	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (85 aa)
	A0A1Y2G7R1	YjeF N-terminal domain-containing protein. (372 aa)
	A0A1Y2G7L7	Uncharacterized protein. (60 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (276 aa)
	A0A1Y2G4Y1	Spindle pole body component. (823 aa)
	A0A1Y2H6S0	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (146 aa)
	A0A1Y2H6T0	60S ribosomal protein L5-2. (306 aa)
	A0A1Y2GLV6	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1285 aa)
	A0A1Y2GKC7	Putative adipose-regulatory protein-domain-containing protein. (599 aa)
	A0A1Y2GK63	Uncharacterized protein. (306 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa)
	A0A1Y2GR55	Brix domain-domain-containing protein. (291 aa)
	A0A1Y2GQP4	Ribosomal protein L23/L15e core domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (147 aa)
	A0A1Y2GQ89	Uncharacterized protein. (329 aa)
	A0A1Y2GPU7	Uncharacterized protein. (251 aa)
	A0A1Y2GN92	SBDS protein C-terminal domain-domain-containing protein. (251 aa)
	A0A1Y2GN69	WD40-repeat-containing domain protein. (371 aa)
	A0A1Y2GM74	ICE2-domain-containing protein. (409 aa)
	A0A1Y2GLG4	Lecithin:cholesterol acyltransferase-domain-containing protein. (720 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (161 aa)
	A0A1Y2GZG2	WD40-repeat-containing domain protein. (478 aa)
	A0A1Y2GYR0	Centromere kinetochore component CENP-T-domain-containing protein. (483 aa)
	A0A1Y2H4U1	Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (263 aa)
	A0A1Y2H558	Domain found in IF2B/IF5-domain-containing protein. (192 aa)
	A0A1Y2H6H7	40S ribosomal protein S19-A. (146 aa)
	A0A1Y2GBF0	Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family. (231 aa)
	A0A1Y2GB27	Uncharacterized protein. (289 aa)
	A0A1Y2GAX8	Septin-type guanine nucleotide-binding (G) domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (314 aa)
	A0A1Y2GAU4	Spc98 family-domain-containing protein. (1203 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (245 aa)
	A0A1Y2H2N0	Uncharacterized protein. (1761 aa)
	A0A1Y2H256	Uncharacterized protein. (192 aa)
	A0A1Y2H242	Translation initiation factor. (399 aa)
	A0A1Y2H0R6	Uncharacterized protein. (823 aa)
	A0A1Y2H037	WD_REPEATS_REGION domain-containing protein. (756 aa)
	A0A1Y2GBN6	Scd6-like Sm domain-domain-containing protein. (468 aa)
	A0A1Y2GZP6	40S ribosomal protein S27. (84 aa)
	A0A1Y2GZN1	Topoisomerase II-associated protein PAT1. (716 aa)
	A0A1Y2GS41	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (474 aa)
	A0A1Y2GSD4	40S ribosomal protein S19-A. (146 aa)
	A0A1Y2GSY9	Brix domain-domain-containing protein. (314 aa)
	A0A1Y2GT76	Uncharacterized protein. (389 aa)
	A0A1Y2GU53	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (472 aa)
	A0A1Y2GUJ7	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	A0A1Y2GUN0	Calponin homology domain-containing protein. (253 aa)
	A0A1Y2GUV5	Putative microtubule binding protein. (258 aa)
	A0A1Y2GVT2	WD40-repeat-containing domain protein. (546 aa)
	A0A1Y2GVV6	Uncharacterized protein. (586 aa)
	A0A1Y2GVW2	Centromere protein Chl4/mis15/CENP-N. (404 aa)
	A0A1Y2GWT0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (308 aa)
	A0A1Y2GWW6	Microtubule associated protein-domain-containing protein. (862 aa)
	A0A1Y2GX91	Spindle pole body component. (910 aa)
	A0A1Y2GXK6	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (220 aa)
	A0A1Y2GYM0	Uncharacterized protein. (181 aa)
	A0A1Y2GZG4	Brix domain-domain-containing protein. (402 aa)
	A0A1Y2GAT5	LsmAD domain-containing protein. (869 aa)
	A0A1Y2G9E2	WD40-repeat-containing domain protein. (607 aa)
	A0A1Y2GRB6	Uncharacterized protein. (516 aa)
	A0A1Y2GR76	40S ribosomal protein S27. (74 aa)
	A0A1Y2H3H1	WD40 repeat-like protein. (852 aa)

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1Y2G4Y1	A0A1Y2GAU4	A0A1Y2G4Y1	A0A1Y2GAU4	Spindle pole body component.	Spc98 family-domain-containing protein.	0.995
A0A1Y2G4Y1	A0A1Y2GK63	A0A1Y2G4Y1	A0A1Y2GK63	Spindle pole body component.	Uncharacterized protein.	0.438
A0A1Y2G4Y1	A0A1Y2GX91	A0A1Y2G4Y1	A0A1Y2GX91	Spindle pole body component.	Spindle pole body component.	0.991
A0A1Y2G4Y1	A0A1Y2H037	A0A1Y2G4Y1	A0A1Y2H037	Spindle pole body component.	WD_REPEATS_REGION domain-containing protein.	0.881
A0A1Y2G7R1	A0A1Y2GAT5	A0A1Y2G7R1	A0A1Y2GAT5	YjeF N-terminal domain-containing protein.	LsmAD domain-containing protein.	0.543
A0A1Y2G7R1	A0A1Y2GBN6	A0A1Y2G7R1	A0A1Y2GBN6	YjeF N-terminal domain-containing protein.	Scd6-like Sm domain-domain-containing protein.	0.899
A0A1Y2G7R1	A0A1Y2GT76	A0A1Y2G7R1	A0A1Y2GT76	YjeF N-terminal domain-containing protein.	Uncharacterized protein.	0.806
A0A1Y2G7R1	A0A1Y2GZN1	A0A1Y2G7R1	A0A1Y2GZN1	YjeF N-terminal domain-containing protein.	Topoisomerase II-associated protein PAT1.	0.976
A0A1Y2G7R1	LSM3	A0A1Y2G7R1	A0A1Y2GJP9	YjeF N-terminal domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.864
A0A1Y2G7R1	LSM4	A0A1Y2G7R1	A0A1Y2H3Y5	YjeF N-terminal domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.920
A0A1Y2G817	A0A1Y2GBF0	A0A1Y2G817	A0A1Y2GBF0	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein L22/L17; Belongs to the universal ribosomal protein uL22 family.	0.978
A0A1Y2G817	A0A1Y2GI24	A0A1Y2G817	A0A1Y2GI24	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein L10e/L16.	0.826
A0A1Y2G817	A0A1Y2GPU7	A0A1Y2G817	A0A1Y2GPU7	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.982
A0A1Y2G817	A0A1Y2GQP4	A0A1Y2G817	A0A1Y2GQP4	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein L23/L15e core domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.671
A0A1Y2G817	A0A1Y2GWT0	A0A1Y2G817	A0A1Y2GWT0	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.755
A0A1Y2G817	A0A1Y2GXK6	A0A1Y2G817	A0A1Y2GXK6	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.755
A0A1Y2G817	A0A1Y2H2N0	A0A1Y2G817	A0A1Y2H2N0	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.753
A0A1Y2G817	A0A1Y2H4U1	A0A1Y2G817	A0A1Y2H4U1	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.944
A0A1Y2G817	A0A1Y2H6S0	A0A1Y2G817	A0A1Y2H6S0	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.671
A0A1Y2G817	RPS0	A0A1Y2G817	A0A1Y2G6G8	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.896