13 items (Lobosporangium transversale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y2GCZ6	RNA recognition motif 2-domain-containing protein. (152 aa)
	A0A1Y2GEV1	mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (122 aa)
	A0A1Y2GH15	Rhodanese-like domain-containing protein. (114 aa)
	A0A1Y2GI03	mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (120 aa)
	A0A1Y2GI36	Uncharacterized protein. (686 aa)
	A0A1Y2GI62	mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (105 aa)
	A0A1Y2GMA0	Uncharacterized protein. (399 aa)
	A0A1Y2GMU0	Uncharacterized protein. (734 aa)
	A0A1Y2GV75	Uncharacterized protein. (489 aa)
	A0A1Y2GYR2	CDT1 domain-containing protein. (472 aa)
	A0A1Y2GZF9	Dual specificity protein phosphatase. (365 aa)
	A0A1Y2H2C3	Anaphase-promoting complex subunit 5-domain-containing protein. (858 aa)
	A0A1Y2GZR9	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (500 aa)

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2GH15	A0A1Y2GMU0	Rhodanese-like domain-containing protein.	Uncharacterized protein.	0.500
A0A1Y2GH15	A0A1Y2GZF9	Rhodanese-like domain-containing protein.	Dual specificity protein phosphatase.	0.835
A0A1Y2GI36	A0A1Y2GMU0	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1Y2GI36	A0A1Y2GV75	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A1Y2GI36	A0A1Y2GYR2	Uncharacterized protein.	CDT1 domain-containing protein.	0.631
A0A1Y2GI36	A0A1Y2GZF9	Uncharacterized protein.	Dual specificity protein phosphatase.	0.826
A0A1Y2GI36	A0A1Y2H2C3	Uncharacterized protein.	Anaphase-promoting complex subunit 5-domain-containing protein.	0.999
A0A1Y2GMU0	A0A1Y2GH15	Uncharacterized protein.	Rhodanese-like domain-containing protein.	0.500
A0A1Y2GMU0	A0A1Y2GI36	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1Y2GMU0	A0A1Y2GV75	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A1Y2GMU0	A0A1Y2GZF9	Uncharacterized protein.	Dual specificity protein phosphatase.	0.837
A0A1Y2GMU0	A0A1Y2H2C3	Uncharacterized protein.	Anaphase-promoting complex subunit 5-domain-containing protein.	0.999
A0A1Y2GV75	A0A1Y2GI36	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A1Y2GV75	A0A1Y2GMU0	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A1Y2GV75	A0A1Y2GYR2	Uncharacterized protein.	CDT1 domain-containing protein.	0.683
A0A1Y2GV75	A0A1Y2GZF9	Uncharacterized protein.	Dual specificity protein phosphatase.	0.753
A0A1Y2GV75	A0A1Y2H2C3	Uncharacterized protein.	Anaphase-promoting complex subunit 5-domain-containing protein.	0.998
A0A1Y2GYR2	A0A1Y2GI36	CDT1 domain-containing protein.	Uncharacterized protein.	0.631
A0A1Y2GYR2	A0A1Y2GV75	CDT1 domain-containing protein.	Uncharacterized protein.	0.683
A0A1Y2GYR2	A0A1Y2H2C3	CDT1 domain-containing protein.	Anaphase-promoting complex subunit 5-domain-containing protein.	0.681