35 items (Lobosporangium transversale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y2GZA2	Kinase-like domain-containing protein. (741 aa)
	A0A1Y2GYX8	Cyclin-domain-containing protein. (104 aa)
	A0A1Y2GYF9	Cyclin-domain-containing protein. (802 aa)
	A0A1Y2GXG9	Cyclin-like protein; Belongs to the cyclin family. (407 aa)
	A0A1Y2GX26	Serine/threonine-protein kinase orb6. (504 aa)
	A0A1Y2GVU3	Uncharacterized protein. (597 aa)
	A0A1Y2GUW0	Kinase-like protein; Belongs to the protein kinase superfamily. (477 aa)
	A0A1Y2GRW3	TFIIH subunit Tfb4/p34. (317 aa)
	A0A1Y2GRI9	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (513 aa)
	A0A1Y2GRD3	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (491 aa)
	A0A1Y2GNQ1	Kinase-like domain-containing protein. (451 aa)
	A0A1Y2GMB2	Cyclin-like protein; Belongs to the cyclin family. (286 aa)
	A0A1Y2GL44	Cyclin-like protein; Belongs to the cyclin family. (411 aa)
	A0A1Y2GH07	Cyclin-like protein; Belongs to the cyclin family. (220 aa)
	A0A1Y2GGD2	Cyclin-domain-containing protein. (258 aa)
	A0A1Y2GEZ8	CTD kinase subunit gamma CTK3-domain-containing protein. (392 aa)
	A0A1Y2GEW8	Cyclin-domain-containing protein. (380 aa)
	A0A1Y2GDW8	Cyclin-like protein; Belongs to the cyclin family. (284 aa)
	A0A1Y2GDT5	Cyclin-like protein; Belongs to the cyclin family. (326 aa)
	A0A1Y2GC98	Helicase ATP-binding domain-containing protein. (788 aa)
	A0A1Y2H290	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (435 aa)
	A0A1Y2H1C5	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (296 aa)
	A0A1Y2H2T9	Cyclin N-terminal domain-containing protein. (456 aa)
	A0A1Y2GBU6	Cyclin-like protein; Belongs to the cyclin family. (288 aa)
	A0A1Y2GAF4	Glycosyl hydrolases family 15-domain-containing protein. (1498 aa)
	A0A1Y2GA58	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily. (354 aa)
	A0A1Y2G9V3	Cyclin N-terminal domain-containing protein. (809 aa)
	A0A1Y2G9K8	Protein serine/threonine kinase; Belongs to the protein kinase superfamily. (303 aa)
	A0A1Y2G9B7	Uncharacterized protein. (76 aa)
	A0A1Y2G925	Uncharacterized protein. (543 aa)
	A0A1Y2G828	Cyclin-domain-containing protein. (533 aa)
	A0A1Y2G7K5	Cyclin-like protein; Belongs to the cyclin family. (307 aa)
	A0A1Y2G7I6	CDK-activating kinase assembly factor MAT1-domain-containing protein. (358 aa)
	A0A1Y2GZR8	Cyclin N-terminal domain-containing protein. (268 aa)
	A0A1Y2GZC4	Protein serine/threonine kinase; Belongs to the protein kinase superfamily. (297 aa)

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2G7I6	A0A1Y2G7K5	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.718
A0A1Y2G7I6	A0A1Y2G9V3	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin N-terminal domain-containing protein.	0.670
A0A1Y2G7I6	A0A1Y2GA58	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.999
A0A1Y2G7I6	A0A1Y2GBU6	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.612
A0A1Y2G7I6	A0A1Y2GC98	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.999
A0A1Y2G7I6	A0A1Y2GDT5	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.999
A0A1Y2G7I6	A0A1Y2GEZ8	CDK-activating kinase assembly factor MAT1-domain-containing protein.	CTD kinase subunit gamma CTK3-domain-containing protein.	0.404
A0A1Y2G7I6	A0A1Y2GH07	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.612
A0A1Y2G7I6	A0A1Y2GL44	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.605
A0A1Y2G7I6	A0A1Y2GMB2	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.612
A0A1Y2G7I6	A0A1Y2GRI9	CDK-activating kinase assembly factor MAT1-domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.997
A0A1Y2G7I6	A0A1Y2GRW3	CDK-activating kinase assembly factor MAT1-domain-containing protein.	TFIIH subunit Tfb4/p34.	0.998
A0A1Y2G7I6	A0A1Y2GVU3	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Uncharacterized protein.	0.997
A0A1Y2G7I6	A0A1Y2GXG9	CDK-activating kinase assembly factor MAT1-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.670
A0A1Y2G7I6	A0A1Y2H290	CDK-activating kinase assembly factor MAT1-domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.998
A0A1Y2G7K5	A0A1Y2G7I6	Cyclin-like protein; Belongs to the cyclin family.	CDK-activating kinase assembly factor MAT1-domain-containing protein.	0.718
A0A1Y2G7K5	A0A1Y2GA58	Cyclin-like protein; Belongs to the cyclin family.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.826
A0A1Y2G7K5	A0A1Y2GDT5	Cyclin-like protein; Belongs to the cyclin family.	Cyclin-like protein; Belongs to the cyclin family.	0.829
A0A1Y2G7K5	A0A1Y2GDW8	Cyclin-like protein; Belongs to the cyclin family.	Cyclin-like protein; Belongs to the cyclin family.	0.450
A0A1Y2G7K5	A0A1Y2GEZ8	Cyclin-like protein; Belongs to the cyclin family.	CTD kinase subunit gamma CTK3-domain-containing protein.	0.853