7 items (Lobosporangium transversale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y2GYE9	Transforming acidic coiled-coil. (210 aa)
	A0A1Y2H286	Uncharacterized protein. (375 aa)
	A0A1Y2GAE9	Aurora kinase A-like protein; Belongs to the protein kinase superfamily. (312 aa)
	A0A1Y2GD74	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1151 aa)
	A0A1Y2GH48	DNA-binding protein. (247 aa)
	A0A1Y2GIH1	Spc19-domain-containing protein. (457 aa)
	A0A1Y2GLV6	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1285 aa)

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2GAE9	A0A1Y2GD74	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.623
A0A1Y2GAE9	A0A1Y2GH48	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	DNA-binding protein.	0.945
A0A1Y2GAE9	A0A1Y2GLV6	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.967
A0A1Y2GAE9	A0A1Y2GYE9	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	Transforming acidic coiled-coil.	0.738
A0A1Y2GAE9	A0A1Y2H286	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.823
A0A1Y2GD74	A0A1Y2GAE9	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	0.623
A0A1Y2GD74	A0A1Y2GH48	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	DNA-binding protein.	0.956
A0A1Y2GD74	A0A1Y2GLV6	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.978
A0A1Y2GH48	A0A1Y2GAE9	DNA-binding protein.	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	0.945
A0A1Y2GH48	A0A1Y2GD74	DNA-binding protein.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.956
A0A1Y2GH48	A0A1Y2GLV6	DNA-binding protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.974
A0A1Y2GH48	A0A1Y2H286	DNA-binding protein.	Uncharacterized protein.	0.588
A0A1Y2GIH1	A0A1Y2H286	Spc19-domain-containing protein.	Uncharacterized protein.	0.964
A0A1Y2GLV6	A0A1Y2GAE9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	0.967
A0A1Y2GLV6	A0A1Y2GD74	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.978
A0A1Y2GLV6	A0A1Y2GH48	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	DNA-binding protein.	0.974
A0A1Y2GLV6	A0A1Y2GYE9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Transforming acidic coiled-coil.	0.463
A0A1Y2GLV6	A0A1Y2H286	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.422
A0A1Y2GYE9	A0A1Y2GAE9	Transforming acidic coiled-coil.	Aurora kinase A-like protein; Belongs to the protein kinase superfamily.	0.738
A0A1Y2GYE9	A0A1Y2GLV6	Transforming acidic coiled-coil.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.463