17 items (Lobosporangium transversale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y2GYB4	Calponin homology domain-containing protein. (202 aa)
	A0A1Y2GWC3	Calponin homology domain-containing protein. (580 aa)
	A0A1Y2GVS9	Hook-related protein family. (688 aa)
	A0A1Y2GUV5	Putative microtubule binding protein. (258 aa)
	A0A1Y2GUN0	Calponin homology domain-containing protein. (253 aa)
	A0A1Y2GU93	Uncharacterized protein. (1844 aa)
	A0A1Y2GTY2	Calponin homology domain-containing protein. (192 aa)
	A0A1Y2GQJ6	Uncharacterized protein. (1188 aa)
	A0A1Y2GSS8	Uncharacterized protein. (1121 aa)
	A0A1Y2GLL2	Calponin homology domain-containing protein. (124 aa)
	A0A1Y2GT39	Uncharacterized protein. (942 aa)
	A0A1Y2GCA2	Uncharacterized protein. (870 aa)
	A0A1Y2GCY6	Fimbrin. (615 aa)
	A0A1Y2GIF1	Calponin homology domain-containing protein. (250 aa)
	A0A1Y2GIP4	Calponin homology domain-containing protein. (215 aa)
	A0A1Y2GIY2	Calponin homology domain-containing protein. (120 aa)
	A0A1Y2GL00	Uncharacterized protein. (893 aa)

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2GCY6	A0A1Y2GIF1	Fimbrin.	Calponin homology domain-containing protein.	0.722
A0A1Y2GCY6	A0A1Y2GIP4	Fimbrin.	Calponin homology domain-containing protein.	0.722
A0A1Y2GCY6	A0A1Y2GQJ6	Fimbrin.	Uncharacterized protein.	0.510
A0A1Y2GCY6	A0A1Y2GTY2	Fimbrin.	Calponin homology domain-containing protein.	0.736
A0A1Y2GCY6	A0A1Y2GWC3	Fimbrin.	Calponin homology domain-containing protein.	0.450
A0A1Y2GCY6	A0A1Y2GYB4	Fimbrin.	Calponin homology domain-containing protein.	0.736
A0A1Y2GIF1	A0A1Y2GCY6	Calponin homology domain-containing protein.	Fimbrin.	0.722
A0A1Y2GIP4	A0A1Y2GCY6	Calponin homology domain-containing protein.	Fimbrin.	0.722
A0A1Y2GIY2	A0A1Y2GQJ6	Calponin homology domain-containing protein.	Uncharacterized protein.	0.436
A0A1Y2GLL2	A0A1Y2GQJ6	Calponin homology domain-containing protein.	Uncharacterized protein.	0.436
A0A1Y2GQJ6	A0A1Y2GCY6	Uncharacterized protein.	Fimbrin.	0.510
A0A1Y2GQJ6	A0A1Y2GIY2	Uncharacterized protein.	Calponin homology domain-containing protein.	0.436
A0A1Y2GQJ6	A0A1Y2GLL2	Uncharacterized protein.	Calponin homology domain-containing protein.	0.436
A0A1Y2GQJ6	A0A1Y2GSS8	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A1Y2GQJ6	A0A1Y2GT39	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A1Y2GQJ6	A0A1Y2GWC3	Uncharacterized protein.	Calponin homology domain-containing protein.	0.627
A0A1Y2GSS8	A0A1Y2GQJ6	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A1Y2GT39	A0A1Y2GQJ6	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A1Y2GTY2	A0A1Y2GCY6	Calponin homology domain-containing protein.	Fimbrin.	0.736
A0A1Y2GWC3	A0A1Y2GCY6	Calponin homology domain-containing protein.	Fimbrin.	0.450