14 items (Lobosporangium transversale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y2GV75	Uncharacterized protein. (489 aa)
	A0A1Y2GW23	Histone H2B; Belongs to the histone H2B family. (136 aa)
	A0A1Y2GLF0	Ubiquitin-related domain-containing protein. (229 aa)
	A0A1Y2GWN7	Histone H2B; Belongs to the histone H2B family. (136 aa)
	A0A1Y2GGY1	Ribosomal protein S27a-domain-containing protein. (155 aa)
	A0A1Y2G526	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (150 aa)
	A0A1Y2GWU2	Histone H2B; Belongs to the histone H2B family. (136 aa)
	A0A1Y2GYB9	Ubiquitin. (74 aa)
	A0A1Y2H1Z4	Uncharacterized protein. (305 aa)
	A0A1Y2GN01	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (414 aa)
	A0A1Y2G9H7	Ribosomal protein S27a-domain-containing protein. (155 aa)
	A0A1Y2GDW8	Cyclin-like protein; Belongs to the cyclin family. (284 aa)
	A0A1Y2GNI9	KxDL domain-containing protein. (151 aa)
	A0A1Y2GV13	Uncharacterized protein. (135 aa)

Your Current Organism:

Lobosporangium transversale

NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y2G526	A0A1Y2G9H7	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Ribosomal protein S27a-domain-containing protein.	0.920
A0A1Y2G526	A0A1Y2GDW8	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Cyclin-like protein; Belongs to the cyclin family.	0.751
A0A1Y2G526	A0A1Y2GGY1	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Ribosomal protein S27a-domain-containing protein.	0.920
A0A1Y2G526	A0A1Y2GLF0	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-related domain-containing protein.	0.885
A0A1Y2G526	A0A1Y2GN01	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.637
A0A1Y2G526	A0A1Y2GV75	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.810
A0A1Y2G526	A0A1Y2GW23	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Histone H2B; Belongs to the histone H2B family.	0.551
A0A1Y2G526	A0A1Y2GWN7	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Histone H2B; Belongs to the histone H2B family.	0.551
A0A1Y2G526	A0A1Y2GWU2	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Histone H2B; Belongs to the histone H2B family.	0.551
A0A1Y2G526	A0A1Y2GYB9	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin.	0.885
A0A1Y2G526	A0A1Y2H1Z4	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.885
A0A1Y2G9H7	A0A1Y2G526	Ribosomal protein S27a-domain-containing protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.920
A0A1Y2G9H7	A0A1Y2GDW8	Ribosomal protein S27a-domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.845
A0A1Y2G9H7	A0A1Y2GLF0	Ribosomal protein S27a-domain-containing protein.	Ubiquitin-related domain-containing protein.	0.912
A0A1Y2G9H7	A0A1Y2GN01	Ribosomal protein S27a-domain-containing protein.	Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.	0.905
A0A1Y2G9H7	A0A1Y2GNI9	Ribosomal protein S27a-domain-containing protein.	KxDL domain-containing protein.	0.775
A0A1Y2G9H7	A0A1Y2GV75	Ribosomal protein S27a-domain-containing protein.	Uncharacterized protein.	0.738
A0A1Y2G9H7	A0A1Y2GW23	Ribosomal protein S27a-domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.854
A0A1Y2G9H7	A0A1Y2GWN7	Ribosomal protein S27a-domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.854
A0A1Y2G9H7	A0A1Y2GWU2	Ribosomal protein S27a-domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.854