STRINGSTRING
Sgly_1596 Sgly_1596 Sgly_1603 Sgly_1603 Sgly_1604 Sgly_1604 Sgly_1605 Sgly_1605 Sgly_1609 Sgly_1609
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sgly_1596Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR003362; KEGG: cth:Cthe_1349 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. (463 aa)
Sgly_1603COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bpb:bpr_I0818 glycosyl transferase GT4 family protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family; PFAM: Glycosyl transferases group 1. (367 aa)
Sgly_1604COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: hiq:CGSHiGG_07880 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2. (298 aa)
Sgly_1605KEGG: she:Shewmr4_1324 hypothetical protein; SPTR: Putative uncharacterized protein. (369 aa)
Sgly_1609Glycosyl transferase family 2; COGs: COG5039 Exopolysaccharide biosynthesis protein; InterPro IPR001173; KEGG: bfs:BF0187 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide pyruvyl transferase; Glycosyl transferase family 2. (682 aa)
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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