STRINGSTRING
Sgly_1597 Sgly_1597 Sgly_1598 Sgly_1598 Sgly_1599 Sgly_1599 Sgly_1600 Sgly_1600 Sgly_1601 Sgly_1601 Sgly_1602 Sgly_1602
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sgly_1597Fucokinase; COGs: COG2605 kinase related to galactokinase and mevalonate kinase; InterPro IPR012887: IPR006204; KEGG: sus:Acid_0569 bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; PFAM: L-fucokinase; GHMP kinase; PRIAM: Fucokinase; SPTR: Predicted kinase related to galactokinase and mevalonate kinase; PFAM: GHMP kinases N terminal domain; L-fucokinase. (1020 aa)
Sgly_1598KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800: IPR001347: IPR000644; KEGG: slt:Slit_0441 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SPTR: Putative uncharacterized protein; TIGRFAM: KpsF/GutQ; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; Belongs to the SIS family. GutQ/KpsF subfamily. (320 aa)
Sgly_1599COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150: IPR006379: IPR013200; KEGG: cpy:Cphy_0779 Cof-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Cof-like hydrolase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB. (272 aa)
Sgly_1600RbsD or FucU transport; COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: ccb:Clocel_1501 RbsD or FucU transport; PFAM: RbsD/FucU transport; SPTR: Fucose operon protein FucU; PFAM: RbsD / FucU transport protein family; Belongs to the RbsD / FucU family. (144 aa)
Sgly_1601COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pjd:Pjdr2_0405 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1. (417 aa)
Sgly_1602Glycosyl transferase family 2; InterPro IPR001173; KEGG: bpb:bpr_I0813 glycosyl transferase GT2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2. (287 aa)
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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