Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OHY90836.1 | OHY91209.1 | BJD16_17330 | BJD16_04485 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.595 |
| OHY90836.1 | OHY91290.1 | BJD16_17330 | BJD16_04925 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| OHY90836.1 | OHY92281.1 | BJD16_17330 | BJD16_13930 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrogenase 2 protein HybA; Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.949 |
| OHY90836.1 | OHY92282.1 | BJD16_17330 | BJD16_13935 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrogenase 2 small subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.610 |
| OHY90836.1 | OHY94765.1 | BJD16_17330 | BJD16_10050 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.890 |
| OHY90836.1 | OHY96690.1 | BJD16_17330 | BJD16_00030 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| OHY90836.1 | napA | BJD16_17330 | BJD16_04920 | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.621 |
| OHY91209.1 | OHY90836.1 | BJD16_04485 | BJD16_17330 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.595 |
| OHY91209.1 | OHY91290.1 | BJD16_04485 | BJD16_04925 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.925 |
| OHY91209.1 | OHY92281.1 | BJD16_04485 | BJD16_13930 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hydrogenase 2 protein HybA; Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| OHY91209.1 | OHY92282.1 | BJD16_04485 | BJD16_13935 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hydrogenase 2 small subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
| OHY91209.1 | OHY94765.1 | BJD16_04485 | BJD16_10050 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.901 |
| OHY91209.1 | OHY95881.1 | BJD16_04485 | BJD16_08115 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Trimethylamine N-oxide reductase I catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.596 |
| OHY91209.1 | OHY96690.1 | BJD16_04485 | BJD16_00030 | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.969 |
| OHY91290.1 | OHY90836.1 | BJD16_04925 | BJD16_17330 | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| OHY91290.1 | OHY91209.1 | BJD16_04925 | BJD16_04485 | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.925 |
| OHY91290.1 | OHY92282.1 | BJD16_04925 | BJD16_13935 | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrogenase 2 small subunit; Involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
| OHY91290.1 | OHY94765.1 | BJD16_04925 | BJD16_10050 | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.483 |
| OHY91290.1 | OHY95881.1 | BJD16_04925 | BJD16_08115 | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trimethylamine N-oxide reductase I catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.930 |
| OHY91290.1 | napA | BJD16_04925 | BJD16_04920 | Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.995 |
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