STRINGSTRING
AFM39992.1 AFM39992.1 pheA pheA AFM40791.1 AFM40791.1 AFM40794.1 AFM40794.1 AFM40820.1 AFM40820.1 pheA-2 pheA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
AFM39992.1PFAM: Aminotransferase class I and II. (391 aa)
pheAPFAM: Prephenate dehydratase; ACT domain. (278 aa)
AFM40791.1Monofunctional chorismate mutase, clade 1; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. (122 aa)
AFM40794.1PFAM: Prephenate dehydrogenase. (296 aa)
AFM40820.1ACT domain-containing protein; Belongs to the UPF0735 family. (148 aa)
pheA-2PFAM: Prephenate dehydratase; ACT domain. (287 aa)
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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