STRINGSTRING
AFM40850.1 AFM40850.1 AFM40853.1 AFM40853.1 AFM40854.1 AFM40854.1 AFM40855.1 AFM40855.1 AFM40856.1 AFM40856.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFM40850.1Hypothetical protein; PFAM: Dihydrodipicolinate reductase, N-terminus. (350 aa)
AFM40853.1D-ornithine 4,5-aminomutase S subunit. (123 aa)
AFM40854.1Putative cobalamin binding protein; PFAM: D-Lysine 5,6-aminomutase alpha subunit; B12 binding domain. (736 aa)
AFM40855.1TIGRFAM: conserved hypothetical protein. (453 aa)
AFM40856.1Putative amino acid racemase; PFAM: Alanine racemase, N-terminal domain. (355 aa)
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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