(23 nodes) ATP-binding cassette (ABC) transporter complex network (Desulfosporosinus acidiphilus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cbiM	ABC-type Co2+ transport system, permease component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (232 aa)
	AFM43262.1	ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter. (258 aa)
	AFM41318.1	Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC; PFAM: ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydC subunit. (610 aa)
	AFM41349.1	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (258 aa)
	AFM41380.1	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter. (614 aa)
	AFM42000.1	ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. (267 aa)
	AFM42053.1	ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter. (504 aa)
	AFM42302.1	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter. (514 aa)
	AFM42460.1	ATPase component of uncharacterized ABC-type transporter; PFAM: ABC transporter. (501 aa)
	AFM39820.1	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (264 aa)
	AFM39325.1	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (260 aa)
	AFM39284.1	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM. (341 aa)
	AFM39283.1	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter. (266 aa)
	AFM39282.1	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ. (312 aa)
	AFM42887.1	ABC-type sulfate/molybdate transport systems, ATPase component; PFAM: ABC transporter. (353 aa)
	AFM42889.1	ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter. (229 aa)
	AFM43030.1	ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain. (368 aa)
	AFM43031.1	ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (600 aa)
	AFM40725.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE. (261 aa)
	AFM40726.1	ABC-type phosphate/phosphonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (272 aa)
	AFM41099.1	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (283 aa)
	AFM41317.1	Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: thiol reductant ABC exporter, CydD subunit. (580 aa)
	AFM40539.1	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (276 aa)

Your Current Organism:

Desulfosporosinus acidiphilus

NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFM39282.1	AFM39283.1	Desaci_0208	Desaci_0209	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	0.997
AFM39282.1	AFM39284.1	Desaci_0208	Desaci_0210	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	0.999
AFM39282.1	AFM40539.1	Desaci_0208	Desaci_1528	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.985
AFM39282.1	AFM41380.1	Desaci_0208	Desaci_2430	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.	0.642
AFM39282.1	AFM42302.1	Desaci_0208	Desaci_3409	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.	0.642
AFM39282.1	cbiM	Desaci_0208	Desaci_1525	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	ABC-type Co2+ transport system, permease component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.990
AFM39283.1	AFM39282.1	Desaci_0209	Desaci_0208	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	0.997
AFM39283.1	AFM39284.1	Desaci_0209	Desaci_0210	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	0.993
AFM39283.1	AFM40539.1	Desaci_0209	Desaci_1528	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.916
AFM39283.1	AFM41380.1	Desaci_0209	Desaci_2430	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.	0.514
AFM39283.1	AFM42302.1	Desaci_0209	Desaci_3409	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.	0.510
AFM39283.1	cbiM	Desaci_0209	Desaci_1525	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	ABC-type Co2+ transport system, permease component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.972
AFM39284.1	AFM39282.1	Desaci_0210	Desaci_0208	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	0.999
AFM39284.1	AFM39283.1	Desaci_0210	Desaci_0209	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	0.993
AFM39284.1	AFM40539.1	Desaci_0210	Desaci_1528	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	0.957
AFM39284.1	cbiM	Desaci_0210	Desaci_1525	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	ABC-type Co2+ transport system, permease component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.	0.927
AFM40539.1	AFM39282.1	Desaci_1528	Desaci_0208	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.	0.985
AFM40539.1	AFM39283.1	Desaci_1528	Desaci_0209	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.	0.916
AFM40539.1	AFM39284.1	Desaci_1528	Desaci_0210	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.	0.957
AFM40539.1	AFM41380.1	Desaci_1528	Desaci_2430	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.	ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.	0.511

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