5 items (Trachymyrmex zeteki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_14701	F-box/WD repeat-containing protein 1A. (612 aa)
	ALC60_08127	RING-box protein 1A. (110 aa)
	ALC60_08157	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
	ALC60_01898	S-phase kinase-associated protein 2. (699 aa)
	ALC60_01021	Cullin-1; Belongs to the cullin family. (776 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_01021	ALC60_01898	A0A151XHX9	A0A151XFA5	Cullin-1; Belongs to the cullin family.	S-phase kinase-associated protein 2.	0.999
ALC60_01021	ALC60_08127	A0A151XHX9	A0A151WXV0	Cullin-1; Belongs to the cullin family.	RING-box protein 1A.	0.999
ALC60_01021	ALC60_08157	A0A151XHX9	A0A151WXX8	Cullin-1; Belongs to the cullin family.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.999
ALC60_01021	ALC60_14701	A0A151XHX9	A0A151WEI1	Cullin-1; Belongs to the cullin family.	F-box/WD repeat-containing protein 1A.	0.995
ALC60_01898	ALC60_01021	A0A151XFA5	A0A151XHX9	S-phase kinase-associated protein 2.	Cullin-1; Belongs to the cullin family.	0.999
ALC60_01898	ALC60_08127	A0A151XFA5	A0A151WXV0	S-phase kinase-associated protein 2.	RING-box protein 1A.	0.994
ALC60_01898	ALC60_08157	A0A151XFA5	A0A151WXX8	S-phase kinase-associated protein 2.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.999
ALC60_01898	ALC60_14701	A0A151XFA5	A0A151WEI1	S-phase kinase-associated protein 2.	F-box/WD repeat-containing protein 1A.	0.943
ALC60_08127	ALC60_01021	A0A151WXV0	A0A151XHX9	RING-box protein 1A.	Cullin-1; Belongs to the cullin family.	0.999
ALC60_08127	ALC60_01898	A0A151WXV0	A0A151XFA5	RING-box protein 1A.	S-phase kinase-associated protein 2.	0.994
ALC60_08127	ALC60_08157	A0A151WXV0	A0A151WXX8	RING-box protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.998
ALC60_08127	ALC60_14701	A0A151WXV0	A0A151WEI1	RING-box protein 1A.	F-box/WD repeat-containing protein 1A.	0.993
ALC60_08157	ALC60_01021	A0A151WXX8	A0A151XHX9	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Cullin-1; Belongs to the cullin family.	0.999
ALC60_08157	ALC60_01898	A0A151WXX8	A0A151XFA5	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	S-phase kinase-associated protein 2.	0.999
ALC60_08157	ALC60_08127	A0A151WXX8	A0A151WXV0	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	RING-box protein 1A.	0.998
ALC60_08157	ALC60_14701	A0A151WXX8	A0A151WEI1	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	F-box/WD repeat-containing protein 1A.	0.995
ALC60_14701	ALC60_01021	A0A151WEI1	A0A151XHX9	F-box/WD repeat-containing protein 1A.	Cullin-1; Belongs to the cullin family.	0.995
ALC60_14701	ALC60_01898	A0A151WEI1	A0A151XFA5	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 2.	0.943
ALC60_14701	ALC60_08127	A0A151WEI1	A0A151WXV0	F-box/WD repeat-containing protein 1A.	RING-box protein 1A.	0.993
ALC60_14701	ALC60_08157	A0A151WEI1	A0A151WXX8	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.995