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ALC60_14830 ALC60_14830 ALC60_14825 ALC60_14825 ALC60_14789 ALC60_14789 ALC60_14767 ALC60_14767 ALC60_14232 ALC60_14232 ALC60_14275 ALC60_14275 ALC60_14141 ALC60_14141 ALC60_14150 ALC60_14150 ALC60_14005 ALC60_14005 ALC60_13942 ALC60_13942 ALC60_13812 ALC60_13812 ALC60_13823 ALC60_13823 LSM5 LSM5 ALC60_13605 ALC60_13605 ALC60_13627 ALC60_13627 ALC60_13555 ALC60_13555 ALC60_13324 ALC60_13324 ALC60_13383 ALC60_13383 ALC60_13310 ALC60_13310 ALC60_13371 ALC60_13371 ALC60_13205 ALC60_13205 ALC60_13203 ALC60_13203 ALC60_13208 ALC60_13208 ALC60_12972 ALC60_12972 ALC60_12754 ALC60_12754 ALC60_12617 ALC60_12617 ALC60_12419 ALC60_12419 ALC60_12234 ALC60_12234 ALC60_12222 ALC60_12222 ALC60_11946 ALC60_11946 ALC60_11934 ALC60_11934 ALC60_12079 ALC60_12079 ALC60_12023 ALC60_12023 LSM8 LSM8 ALC60_11990 ALC60_11990 ALC60_11714 ALC60_11714 ALC60_11232 ALC60_11232 ALC60_11131 ALC60_11131 ALC60_10950 ALC60_10950 ALC60_10986 ALC60_10986 ALC60_10983 ALC60_10983 ALC60_10776 ALC60_10776 ALC60_10665 ALC60_10665 ALC60_10689 ALC60_10689 ALC60_10367 ALC60_10367 ALC60_10356 ALC60_10356 ALC60_10212 ALC60_10212 ALC60_10162 ALC60_10162 ALC60_10022 ALC60_10022 ALC60_10080 ALC60_10080 ALC60_09920 ALC60_09920 ALC60_09855 ALC60_09855 ALC60_09874 ALC60_09874 ALC60_09550 ALC60_09550 ALC60_09346 ALC60_09346 ALC60_09349 ALC60_09349 ALC60_09352 ALC60_09352 ALC60_09215 ALC60_09215 ALC60_08981 ALC60_08981 ALC60_09082 ALC60_09082 ALC60_08967 ALC60_08967 ALC60_08679 ALC60_08679 LSM4 LSM4 ALC60_08387 ALC60_08387 ALC60_08255 ALC60_08255 ALC60_07708 ALC60_07708 ALC60_07740 ALC60_07740 ALC60_07753 ALC60_07753 ALC60_07677 ALC60_07677 ALC60_07572 ALC60_07572 ALC60_07445 ALC60_07445 ALC60_07446 ALC60_07446 ALC60_07301 ALC60_07301 ALC60_07030 ALC60_07030 ALC60_06996 ALC60_06996 ALC60_06802 ALC60_06802 ALC60_06728 ALC60_06728 ALC60_06442 ALC60_06442 ALC60_06237 ALC60_06237 ALC60_06211 ALC60_06211 ALC60_06057 ALC60_06057 ALC60_05886 ALC60_05886 ALC60_05905 ALC60_05905 ALC60_05746 ALC60_05746 ALC60_05929 ALC60_05929 ALC60_05903 ALC60_05903 ALC60_05466 ALC60_05466 ALC60_05403 ALC60_05403 ALC60_05423 ALC60_05423 ALC60_05399 ALC60_05399 ALC60_05314 ALC60_05314 ALC60_05306 ALC60_05306 ALC60_05299 ALC60_05299 ALC60_05028 ALC60_05028 ALC60_04965 ALC60_04965 ALC60_04745 ALC60_04745 ALC60_04330 ALC60_04330 ALC60_03973 ALC60_03973 ALC60_03931 ALC60_03931 ALC60_03843 ALC60_03843 ALC60_03766 ALC60_03766 ALC60_03675 ALC60_03675 ALC60_03488 ALC60_03488 ALC60_03326 ALC60_03326 ALC60_03183 ALC60_03183 ALC60_02940 ALC60_02940 ALC60_02919 ALC60_02919 ALC60_02937 ALC60_02937 ALC60_03004 ALC60_03004 ALC60_02947 ALC60_02947 ALC60_03016 ALC60_03016 ALC60_03084 ALC60_03084 ALC60_02610 ALC60_02610 ALC60_02692 ALC60_02692 ALC60_02276 ALC60_02276 ALC60_02274 ALC60_02274 ALC60_02322 ALC60_02322 ALC60_02099 ALC60_02099 ALC60_01901 ALC60_01901 ALC60_01488 ALC60_01488 ALC60_01591 ALC60_01591 ALC60_01115 ALC60_01115 LSM3 LSM3 ALC60_00815 ALC60_00815
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_14830U6 snRNA-associated Sm-like protein LSm7. (117 aa)
ALC60_14825Small nuclear ribonucleoprotein Sm D2. (102 aa)
ALC60_14789Pre-mRNA-splicing factor SLU7. (572 aa)
ALC60_14767Transferrin. (608 aa)
ALC60_14232Puff-specific protein Bx42. (545 aa)
ALC60_14275Pre-mRNA branch site p14-like protein. (125 aa)
ALC60_14141Transcription elongation regulator 1. (1252 aa)
ALC60_14150Uncharacterized protein. (430 aa)
ALC60_14005Pre-mRNA-splicing factor RBM22. (415 aa)
ALC60_13942Zinc finger matrin-type protein 2. (197 aa)
ALC60_13812Uncharacterized protein. (805 aa)
ALC60_13823Survival of motor neuron-related-splicing factor 30. (235 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (86 aa)
ALC60_13605Splicing factor 3A subunit 2. (274 aa)
ALC60_13627tRNA selenocysteine 1-associated protein 1. (295 aa)
ALC60_13555Coiled-coil domain-containing protein 94. (352 aa)
ALC60_13324Pre-mRNA-splicing factor 18. (345 aa)
ALC60_13383UPF0667 protein C1orf55 like protein. (267 aa)
ALC60_13310Peptidyl-prolyl cis-trans isomerase 1. (554 aa)
ALC60_13371Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (776 aa)
ALC60_13205Nkap_C domain-containing protein. (275 aa)
ALC60_13203Splicing factor 3B subunit 3. (1217 aa)
ALC60_13208Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (421 aa)
ALC60_12972Pre-mRNA-processing factor 39. (1043 aa)
ALC60_12754Protein CWC15 like protein A. (225 aa)
ALC60_12617U4/U6 small nuclear ribonucleoprotein Prp3. (1337 aa)
ALC60_12419Uncharacterized protein C9orf78. (297 aa)
ALC60_12234ATP-dependent RNA helicase DDX42; Belongs to the DEAD box helicase family. (766 aa)
ALC60_12222Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (890 aa)
ALC60_11946Smad nuclear-interacting protein 1. (298 aa)
ALC60_11934Pre-mRNA-splicing factor CWC22 like protein. (750 aa)
ALC60_12079RNA-binding protein 25. (599 aa)
ALC60_12023GC-rich sequence DNA-binding factor 1. (2260 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (85 aa)
ALC60_11990Putative ATP-dependent RNA helicase DHX33. (691 aa)
ALC60_11714RNA-binding protein 40. (332 aa)
ALC60_11232Splicing factor U2AF 50 kDa subunit. (682 aa)
ALC60_11131Uncharacterized protein. (631 aa)
ALC60_10950U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (201 aa)
ALC60_10986Splicing factor 3B subunit 2. (744 aa)
ALC60_10983Pre-mRNA-splicing factor SPF27. (244 aa)
ALC60_10776Tr-type G domain-containing protein. (981 aa)
ALC60_10665Protein FAM50 like protein. (287 aa)
ALC60_10689Small nuclear ribonucleoprotein G. (64 aa)
ALC60_10367Protein FAM32A. (114 aa)
ALC60_10356U1 small nuclear ribonucleoprotein 70 kDa. (405 aa)
ALC60_10212Cell division cycle 5-related protein. (787 aa)
ALC60_10162U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (383 aa)
ALC60_10022Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ALC60_10080Serine/arginine repetitive matrix protein 2. (1086 aa)
ALC60_09920Gastrulation defective protein 1 like protein. (656 aa)
ALC60_09855PHD finger-like domain-containing protein 5A. (110 aa)
ALC60_09874Putative RNA-binding protein Luc7-like 2. (359 aa)
ALC60_09550Peptidyl-prolyl cis-trans isomerase-like 1. (310 aa)
ALC60_09346Splicing factor 45. (384 aa)
ALC60_09349U2 small nuclear ribonucleoprotein B. (231 aa)
ALC60_09352CWF19-like protein 2. (627 aa)
ALC60_09215WW domain-binding protein 4. (454 aa)
ALC60_08981U4/U6 small nuclear ribonucleoprotein Prp31. (489 aa)
ALC60_09082U4/U6.U5 tri-snRNP-associated protein 1. (743 aa)
ALC60_08967Pre-mRNA-splicing factor ISY1 like protein. (234 aa)
ALC60_08679Splicing factor 3B subunit 1. (1372 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
ALC60_08387Splicing factor 1. (611 aa)
ALC60_08255Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (225 aa)
ALC60_07708Uncharacterized protein. (324 aa)
ALC60_07740Pre-mRNA-splicing factor Syf2. (230 aa)
ALC60_07753Putative ATP-dependent RNA helicase DDX46. (862 aa)
ALC60_07677Calcium homeostasis endoplasmic reticulum protein. (773 aa)
ALC60_07572Protein BUD31 like protein. (144 aa)
ALC60_07445Tuftelin-interacting protein 11. (509 aa)
ALC60_07446Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (611 aa)
ALC60_07301Pre-mRNA-processing factor 6. (931 aa)
ALC60_07030Serine/threonine-protein kinase prp4. (996 aa)
ALC60_06996WD40 repeat-containing protein SMU1. (510 aa)
ALC60_06802Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
ALC60_06728Uncharacterized protein. (249 aa)
ALC60_06442Leucine-rich repeat-containing protein 51. (200 aa)
ALC60_06237U6 snRNA-associated Sm-like protein LSm6. (106 aa)
ALC60_06211Pre-mRNA-splicing factor CWC25 like protein. (488 aa)
ALC60_06057Tuftelin-interacting protein 11. (778 aa)
ALC60_05886U4/U6 small nuclear ribonucleoprotein Prp4. (523 aa)
ALC60_05905ATP-dependent RNA helicase DHX8. (1203 aa)
ALC60_05746Uncharacterized protein. (2077 aa)
ALC60_05929U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (141 aa)
ALC60_05903Microfibrillar-associated protein 1. (456 aa)
ALC60_05466Leucine-rich repeat-containing protein C10orf11 like protein. (217 aa)
ALC60_05403Pre-mRNA-splicing factor SYF1. (839 aa)
ALC60_05423U4/U6.U5 tri-snRNP-associated protein 2. (507 aa)
ALC60_05399Cysteine string protein. (190 aa)
ALC60_05314Nucleolar protein of 40 kDa. (256 aa)
ALC60_05306Intron-binding protein aquarius. (1419 aa)
ALC60_05299Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (142 aa)
ALC60_05028Pre-mRNA-processing-splicing factor 8. (2372 aa)
ALC60_04965ATP-dependent RNA helicase DBP3. (730 aa)
ALC60_04745Serine/threonine-protein phosphatase 1 regulatory subunit 10. (1255 aa)
ALC60_04330Protein Red. (586 aa)
ALC60_03973Pre-mRNA-splicing factor 38A. (307 aa)
ALC60_03931Splicing factor 3B subunit 4. (405 aa)
ALC60_03843Beta-catenin-like protein 1. (577 aa)
ALC60_03766Putative U2 small nuclear ribonucleoprotein A. (246 aa)
ALC60_03675CDK5RAP1-like protein. (1418 aa)
ALC60_03488Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1132 aa)
ALC60_03326Small nuclear ribonucleoprotein Sm D3. (142 aa)
ALC60_03183Pre-mRNA-processing factor 19. (367 aa)
ALC60_02940Splicing factor 3A subunit 3. (1056 aa)
ALC60_02919PRKR-interacting protein 1 like protein. (226 aa)
ALC60_02937Peroxisome proliferator-activated receptor gamma coactivator-related protein 1. (877 aa)
ALC60_03004U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (175 aa)
ALC60_02947WD repeat-containing protein 69. (442 aa)
ALC60_03016Pre-mRNA-processing factor 17. (565 aa)
ALC60_03084Splicing factor 3A subunit 1. (767 aa)
ALC60_02610Coiled-coil domain-containing protein 12. (146 aa)
ALC60_02692Uncharacterized protein. (1018 aa)
ALC60_02276BUD13 like protein. (596 aa)
ALC60_02274Zinc finger matrin-type protein 5. (166 aa)
ALC60_02322Small nuclear ribonucleoprotein-associated protein. (250 aa)
ALC60_02099Pleiotropic regulator 1. (434 aa)
ALC60_01901U5 small nuclear ribonucleoprotein 40 kDa protein. (349 aa)
ALC60_01488Squamous cell carcinoma antigen recognized by T-cells 3. (749 aa)
ALC60_01591Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (1038 aa)
ALC60_01115Uncharacterized protein. (489 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (67 aa)
ALC60_00815Protein crooked neck. (643 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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