STRINGSTRING
ALC60_09445 ALC60_09445 ALC60_13513 ALC60_13513 ALC60_13498 ALC60_13498 ALC60_13496 ALC60_13496 ALC60_13361 ALC60_13361 ALC60_13181 ALC60_13181 ALC60_13161 ALC60_13161 ALC60_13107 ALC60_13107 ALC60_12638 ALC60_12638 ALC60_11953 ALC60_11953 ALC60_12031 ALC60_12031 ALC60_11779 ALC60_11779 ALC60_11105 ALC60_11105 ALC60_10454 ALC60_10454 ALC60_09677 ALC60_09677 ALC60_09675 ALC60_09675 ALC60_09672 ALC60_09672 ALC60_09450 ALC60_09450 ALC60_06108 ALC60_06108 ALC60_05528 ALC60_05528 ALC60_05526 ALC60_05526 ALC60_05139 ALC60_05139 ALC60_04332 ALC60_04332 ALC60_04038 ALC60_04038 ALC60_03682 ALC60_03682 ALC60_03683 ALC60_03683 ALC60_03185 ALC60_03185 ALC60_03012 ALC60_03012 ALC60_03008 ALC60_03008 ALC60_02840 ALC60_02840 ALC60_02563 ALC60_02563 ALC60_02011 ALC60_02011 ALC60_02000 ALC60_02000 ALC60_01922 ALC60_01922 ALC60_01838 ALC60_01838 ALC60_01586 ALC60_01586 ALC60_00708 ALC60_00708 ALC60_00512 ALC60_00512 ALC60_01737 ALC60_01737 ALC60_09443 ALC60_09443 ALC60_08658 ALC60_08658 ALC60_08700 ALC60_08700 ALC60_08016 ALC60_08016 ALC60_07820 ALC60_07820 ALC60_07821 ALC60_07821 ALC60_07825 ALC60_07825 ALC60_07559 ALC60_07559 ALC60_07563 ALC60_07563 ALC60_06848 ALC60_06848 ALC60_06605 ALC60_06605 ALC60_06862 ALC60_06862
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_09445Putative RNA-binding protein orb2. (333 aa)
ALC60_13513RNA-binding protein squid. (357 aa)
ALC60_13498RNA-binding protein 9. (295 aa)
ALC60_13496Uncharacterized protein. (303 aa)
ALC60_13361Thioredoxin domain-containing protein 11. (919 aa)
ALC60_13181Polyadenylate-binding protein. (1015 aa)
ALC60_13161Roquin. (998 aa)
ALC60_13107Leucine-rich PPR motif-containing protein, mitochondrial. (1004 aa)
ALC60_12638RRM domain-containing protein. (261 aa)
ALC60_11953Protein BTG3. (269 aa)
ALC60_12031Vigilin. (1240 aa)
ALC60_11779Uncharacterized protein. (832 aa)
ALC60_11105Exosome complex exonuclease RRP45. (389 aa)
ALC60_10454Fragile X mental retardation syndrome-related protein 1. (657 aa)
ALC60_09677CUGBP Elav-like family member 2. (494 aa)
ALC60_09675Uncharacterized protein. (86 aa)
ALC60_09672CUGBP Elav-like family member 3-A. (211 aa)
ALC60_09450Uncharacterized protein. (333 aa)
ALC60_06108Cleavage and polyadenylation specificity factor subunit 1. (1607 aa)
ALC60_05528RNA-binding protein 38. (412 aa)
ALC60_05526Uncharacterized protein. (396 aa)
ALC60_05139Vacuolar protein-sorting-associated protein 36. (402 aa)
ALC60_04332Sex-lethal like protein. (283 aa)
ALC60_04038RNA-binding protein squid. (293 aa)
ALC60_03682KH domain-containing protein. (368 aa)
ALC60_03683STAR_dimer domain-containing protein. (82 aa)
ALC60_03185Uncharacterized protein. (836 aa)
ALC60_03012Maternal protein pumilio. (808 aa)
ALC60_03008Pumilio like protein 2. (577 aa)
ALC60_02840Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (680 aa)
ALC60_02563Nucleolysin TIAR. (393 aa)
ALC60_02011Phosphatidylinositol-5-phosphate 4-kinase type-2 beta. (500 aa)
ALC60_02000RNA-binding protein squid. (311 aa)
ALC60_01922Polypyrimidine tract-binding protein 1. (593 aa)
ALC60_01838Protein TIS11. (345 aa)
ALC60_01586Heterogeneous nuclear ribonucleoprotein 27C. (400 aa)
ALC60_00708Myelin expression factor 2. (650 aa)
ALC60_00512B-box type zinc finger protein ncl-1. (924 aa)
ALC60_01737Cold shock domain-containing protein E1. (880 aa)
ALC60_09443Cytoplasmic polyadenylation element-binding protein 1-B. (672 aa)
ALC60_08658Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
ALC60_08700Uncharacterized protein. (145 aa)
ALC60_08016Exosome complex exonuclease RRP43. (278 aa)
ALC60_07820Uncharacterized protein. (529 aa)
ALC60_07821Protein boule. (406 aa)
ALC60_07825SRA stem-loop-interacting RNA-binding protein, mitochondrial. (89 aa)
ALC60_07559Insulin-like growth factor 2 mRNA-binding protein 3-A. (63 aa)
ALC60_07563Insulin-like growth factor 2 mRNA-binding protein 1. (593 aa)
ALC60_06848Double-stranded RNA-binding protein Staufen like protein 2. (788 aa)
ALC60_06605Gem-associated protein 5. (1319 aa)
ALC60_06862Poly(A) RNA polymerase protein cid1. (406 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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