Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALC60_00190 | ALC60_02285 | A0A151XJZ8 | A0A151XE56 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | FACT complex subunit spt16. | 0.855 |
| ALC60_00190 | ALC60_02740 | A0A151XJZ8 | A0A151XDC5 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | DNA-directed RNA polymerase II subunit RPB3. | 0.581 |
| ALC60_00190 | ALC60_03655 | A0A151XJZ8 | A0A151XAF2 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. | 0.426 |
| ALC60_00190 | ALC60_03859 | A0A151XJZ8 | A0A151XA11 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Serine-arginine protein 55. | 0.433 |
| ALC60_00190 | ALC60_03861 | A0A151XJZ8 | A0A151X9Z7 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Putative DNA helicase INO80 complex like protein 1. | 0.449 |
| ALC60_00190 | ALC60_04726 | A0A151XJZ8 | A0A151X7L1 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Poly [ADP-ribose] polymerase. | 0.716 |
| ALC60_00190 | ALC60_06025 | A0A151XJZ8 | A0A151X3P9 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.502 |
| ALC60_00190 | ALC60_07105 | A0A151XJZ8 | A0A151X0P6 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Histone deacetylase Rpd3. | 0.502 |
| ALC60_00190 | ALC60_11618 | A0A151XJZ8 | A0A151WNF6 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | PHD finger protein 20-like protein 1. | 0.400 |
| ALC60_00190 | ALC60_14053 | A0A151XJZ8 | A0A151WGL1 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Chromatin-remodeling complex ATPase chain Iswi. | 0.505 |
| ALC60_00435 | ALC60_00453 | A0A151XJ62 | A0A151XJU2 | Polycomb group protein Pc. | Nipped-B protein. | 0.457 |
| ALC60_00435 | ALC60_00613 | A0A151XJ62 | A0A151XIH5 | Polycomb group protein Pc. | Uncharacterized protein. | 0.851 |
| ALC60_00435 | ALC60_00614 | A0A151XJ62 | A0A151XIP1 | Polycomb group protein Pc. | Histone H3. | 0.851 |
| ALC60_00435 | ALC60_01361 | A0A151XJ62 | A0A151XHD2 | Polycomb group protein Pc. | Histone H3; Belongs to the histone H3 family. | 0.856 |
| ALC60_00435 | ALC60_02368 | A0A151XJ62 | A0A151XEH1 | Polycomb group protein Pc. | Lethal(3)malignant brain tumor-like protein 3. | 0.865 |
| ALC60_00435 | ALC60_02418 | A0A151XJ62 | A0A151XEQ6 | Polycomb group protein Pc. | Histone H2A; Belongs to the histone H2A family. | 0.690 |
| ALC60_00435 | ALC60_02420 | A0A151XJ62 | A0A151XEH3 | Polycomb group protein Pc. | Histone H2A; Belongs to the histone H2A family. | 0.690 |
| ALC60_00435 | ALC60_02426 | A0A151XJ62 | A0A151XES9 | Polycomb group protein Pc. | Histone H3; Belongs to the histone H3 family. | 0.856 |
| ALC60_00435 | ALC60_02444 | A0A151XJ62 | A0A151XEI6 | Polycomb group protein Pc. | Histone H2A; Belongs to the histone H2A family. | 0.690 |
| ALC60_00435 | ALC60_03624 | A0A151XJ62 | A0A151XBA5 | Polycomb group protein Pc. | Putative histone-binding protein Caf1. | 0.796 |
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