34 items (Trachymyrmex zeteki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_05191	Sn1-specific diacylglycerol lipase beta. (670 aa)
	ALC60_14746	Alpha-tocopherol transfer protein. (301 aa)
	ALC60_14745	Alpha-tocopherol transfer protein. (268 aa)
	ALC60_14747	Alpha-tocopherol transfer protein. (308 aa)
	ALC60_14391	Phosphatidate cytidylyltransferase; Belongs to the CDS family. (438 aa)
	ALC60_13699	Rhodopsin. (386 aa)
	ALC60_13700	Rhodopsin; Belongs to the G-protein coupled receptor 1 family. (573 aa)
	ALC60_11780	Multiple PDZ domain protein. (1630 aa)
	ALC60_11313	Phospholipase. (1120 aa)
	ALC60_09791	Opsin, blue-sensitive. (436 aa)
	ALC60_09263	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1114 aa)
	ALC60_09299	Ras-related protein Rab-6A. (211 aa)
	ALC60_08992	Sodium/calcium exchanger 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (876 aa)
	ALC60_07698	Beta,beta-carotene 15,15'-monooxygenase. (641 aa)
	ALC60_08030	CDP-diacylglycerol--inositol 3-phosphatidyltransferase. (188 aa)
	ALC60_06171	Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha. (625 aa)
	ALC60_05926	Diacylglycerol kinase. (1306 aa)
	ALC60_05717	Protein croquemort; Belongs to the CD36 family. (490 aa)
	ALC60_05195	Phosphoinositide phospholipase C. (929 aa)
	ALC60_04543	Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1631 aa)
	ALC60_04575	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (205 aa)
	ALC60_04316	Uncharacterized protein. (395 aa)
	ALC60_04317	Sn1-specific diacylglycerol lipase alpha. (708 aa)
	inx-5	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (363 aa)
	inx-6	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (358 aa)
	ALC60_03548	Arrestin like protein. (431 aa)
	ALC60_03192	Transient receptor potential protein; Belongs to the transient receptor (TC 1.A.4) family. (1101 aa)
	ALC60_02975	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (691 aa)
	ALC60_02389	Calcium and integrin-binding family member 2. (250 aa)
	ALC60_02449	Neither inactivation nor afterpotential protein C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1565 aa)
	ALC60_01939	Guanine nucleotide-binding protein subunit beta-2. (346 aa)
	ALC60_01519	MORN repeat-containing protein 4. (253 aa)
	ALC60_00872	Head-specific guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (737 aa)
	ALC60_00196	Ceramide kinase. (535 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_00196	ALC60_11313	A0A151XK37	A0A151WNY2	Ceramide kinase.	Phospholipase.	0.544
ALC60_00872	ALC60_04575	A0A151XI26	A0A151X890	Head-specific guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.448
ALC60_01519	ALC60_01939	A0A151XGK6	A0A151XFD9	MORN repeat-containing protein 4.	Guanine nucleotide-binding protein subunit beta-2.	0.548
ALC60_01519	ALC60_02449	A0A151XGK6	A0A151XEP3	MORN repeat-containing protein 4.	Neither inactivation nor afterpotential protein C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.619
ALC60_01519	ALC60_04543	A0A151XGK6	A0A151X7W0	MORN repeat-containing protein 4.	Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.522
ALC60_01939	ALC60_01519	A0A151XFD9	A0A151XGK6	Guanine nucleotide-binding protein subunit beta-2.	MORN repeat-containing protein 4.	0.548
ALC60_01939	ALC60_02449	A0A151XFD9	A0A151XEP3	Guanine nucleotide-binding protein subunit beta-2.	Neither inactivation nor afterpotential protein C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.461
ALC60_01939	ALC60_03192	A0A151XFD9	A0A151XBS4	Guanine nucleotide-binding protein subunit beta-2.	Transient receptor potential protein; Belongs to the transient receptor (TC 1.A.4) family.	0.621
ALC60_01939	ALC60_03548	A0A151XFD9	A0A151XB51	Guanine nucleotide-binding protein subunit beta-2.	Arrestin like protein.	0.844
ALC60_01939	ALC60_04543	A0A151XFD9	A0A151X7W0	Guanine nucleotide-binding protein subunit beta-2.	Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.405
ALC60_01939	ALC60_04575	A0A151XFD9	A0A151X890	Guanine nucleotide-binding protein subunit beta-2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.989
ALC60_01939	ALC60_05195	A0A151XFD9	A0A151X683	Guanine nucleotide-binding protein subunit beta-2.	Phosphoinositide phospholipase C.	0.857
ALC60_01939	ALC60_09263	A0A151XFD9	A0A151WUV0	Guanine nucleotide-binding protein subunit beta-2.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.857
ALC60_01939	ALC60_09791	A0A151XFD9	A0A151WTH7	Guanine nucleotide-binding protein subunit beta-2.	Opsin, blue-sensitive.	0.829
ALC60_01939	ALC60_11780	A0A151XFD9	A0A151WMS7	Guanine nucleotide-binding protein subunit beta-2.	Multiple PDZ domain protein.	0.661
ALC60_01939	ALC60_13699	A0A151XFD9	A0A151WHG8	Guanine nucleotide-binding protein subunit beta-2.	Rhodopsin.	0.856
ALC60_01939	ALC60_13700	A0A151XFD9	A0A151WHK3	Guanine nucleotide-binding protein subunit beta-2.	Rhodopsin; Belongs to the G-protein coupled receptor 1 family.	0.940
ALC60_02389	ALC60_02449	A0A151XEE4	A0A151XEP3	Calcium and integrin-binding family member 2.	Neither inactivation nor afterpotential protein C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.841
ALC60_02389	ALC60_03192	A0A151XEE4	A0A151XBS4	Calcium and integrin-binding family member 2.	Transient receptor potential protein; Belongs to the transient receptor (TC 1.A.4) family.	0.435
ALC60_02389	ALC60_04543	A0A151XEE4	A0A151X7W0	Calcium and integrin-binding family member 2.	Myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.841