STRINGSTRING
ALC60_07105 ALC60_07105 ALC60_14163 ALC60_14163 ALC60_06025 ALC60_06025 ALC60_04107 ALC60_04107 ALC60_03624 ALC60_03624 ALC60_00683 ALC60_00683
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_07105Histone deacetylase Rpd3. (491 aa)
ALC60_14163Metastasis-associated protein MTA1. (951 aa)
ALC60_06025Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (497 aa)
ALC60_04107Transcriptional repressor p66-alpha. (632 aa)
ALC60_03624Putative histone-binding protein Caf1. (512 aa)
ALC60_00683Methyl-CpG-binding domain protein 3. (221 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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