STRINGSTRING
ALC60_14635 ALC60_14635 ALC60_11714 ALC60_11714 ALC60_12677 ALC60_12677 ALC60_13238 ALC60_13238 ALC60_14468 ALC60_14468 ALC60_07170 ALC60_07170 ALC60_08988 ALC60_08988 ALC60_09763 ALC60_09763 ALC60_10428 ALC60_10428 ALC60_10439 ALC60_10439 ALC60_11309 ALC60_11309 PAN2 PAN2 ALC60_12442 ALC60_12442 ALC60_01676 ALC60_01676 ALC60_02443 ALC60_02443 ALC60_02986 ALC60_02986 ALC60_02985 ALC60_02985 ALC60_04428 ALC60_04428 ALC60_04841 ALC60_04841 ALC60_05585 ALC60_05585 ALC60_06438 ALC60_06438 ALC60_06208 ALC60_06208
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_14635Exonuclease 3'-5' domain-containing protein 2. (612 aa)
ALC60_11714RNA-binding protein 40. (332 aa)
ALC60_12677Leucine-rich repeat-containing protein 27. (560 aa)
ALC60_132385'-3' exoribonuclease 1. (1684 aa)
ALC60_14468Exosome component 10. (1270 aa)
ALC60_07170DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1242 aa)
ALC60_08988Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (720 aa)
ALC60_09763DIS3-like exonuclease 2; Belongs to the RNR ribonuclease family. (924 aa)
ALC60_10428UPF0406 protein C16orf57 like protein. (256 aa)
ALC60_104395'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (866 aa)
ALC60_11309Protein angel like protein 2. (554 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1353 aa)
ALC60_12442Exosome complex exonuclease RRP44. (925 aa)
ALC60_016762',5'-phosphodiesterase 12. (567 aa)
ALC60_02443Putative oligoribonuclease. (184 aa)
ALC60_02986CCR4-NOT transcription complex subunit 6. (192 aa)
ALC60_02985CCR4-NOT transcription complex subunit 6-like-B. (458 aa)
ALC60_04428Putative oligoribonuclease. (206 aa)
ALC60_04841Poly(A)-specific ribonuclease PARN-like domain-containing protein 1. (593 aa)
ALC60_05585Putative RNA exonuclease NEF-sp. (695 aa)
ALC60_06438CCR4-NOT transcription complex subunit 7. (315 aa)
ALC60_06208ERI1 exoribonuclease 3. (231 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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