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ALC60_11570 ALC60_11570 ALC60_11714 ALC60_11714 ALC60_12049 ALC60_12049 ALC60_00145 ALC60_00145 ALC60_11899 ALC60_11899 ALC60_12152 ALC60_12152 ALC60_13118 ALC60_13118 ALC60_13115 ALC60_13115 ALC60_13332 ALC60_13332 ALC60_13625 ALC60_13625 ALC60_14126 ALC60_14126 ALC60_14479 ALC60_14479 ALC60_14477 ALC60_14477 ALC60_14468 ALC60_14468 ALC60_14705 ALC60_14705 ALC60_06898 ALC60_06898 ALC60_01346 ALC60_01346 ALC60_09443 ALC60_09443 ALC60_09901 ALC60_09901 ALC60_01332 ALC60_01332 ALC60_10205 ALC60_10205 ALC60_10428 ALC60_10428 ALC60_10419 ALC60_10419 ALC60_10765 ALC60_10765 ALC60_11105 ALC60_11105 ALC60_11164 ALC60_11164 ALC60_11565 ALC60_11565 ALC60_00716 ALC60_00716 ALC60_00306 ALC60_00306 ALC60_02176 ALC60_02176 ALC60_02500 ALC60_02500 ALC60_02757 ALC60_02757 ALC60_02706 ALC60_02706 ALC60_02704 ALC60_02704 ALC60_02862 ALC60_02862 ALC60_03114 ALC60_03114 ALC60_03194 ALC60_03194 ALC60_03714 ALC60_03714 ALC60_03715 ALC60_03715 ALC60_03674 ALC60_03674 ALC60_03855 ALC60_03855 ALC60_04246 ALC60_04246 ALC60_04627 ALC60_04627 ALC60_04981 ALC60_04981 ALC60_04971 ALC60_04971 ALC60_05585 ALC60_05585 ALC60_05800 ALC60_05800 ALC60_06012 ALC60_06012 ALC60_06108 ALC60_06108 ALC60_06208 ALC60_06208 ALC60_06579 ALC60_06579 ALC60_06613 ALC60_06613 ALC60_06862 ALC60_06862 ALC60_06713 ALC60_06713 ALC60_07078 ALC60_07078 ALC60_07347 ALC60_07347 ALC60_07609 ALC60_07609 ALC60_08016 ALC60_08016 ALC60_08212 ALC60_08212 ALC60_08379 ALC60_08379 ALC60_08658 ALC60_08658 ALC60_08988 ALC60_08988
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_11570Integrator complex subunit 7. (943 aa)
ALC60_11714RNA-binding protein 40. (332 aa)
ALC60_12049Integrator complex subunit 12. (269 aa)
ALC60_00145Exosome complex exonuclease MTR3. (281 aa)
ALC60_11899Pre-mRNA cleavage complex 2 protein Pcf11. (1821 aa)
ALC60_12152Symplekin. (1052 aa)
ALC60_13118Integrator complex subunit 2. (1113 aa)
ALC60_13115PAP-associated domain-containing protein 5. (651 aa)
ALC60_13332Ribonuclease Z, mitochondrial. (810 aa)
ALC60_13625Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (422 aa)
ALC60_14126Regulation of nuclear pre-mRNA domain-containing protein 2. (1275 aa)
ALC60_14479WD repeat-containing protein 33. (1046 aa)
ALC60_14477RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (195 aa)
ALC60_14468Exosome component 10. (1270 aa)
ALC60_14705Histone RNA hairpin-binding protein. (226 aa)
ALC60_06898U6 snRNA-specific terminal uridylyltransferase 1. (720 aa)
ALC60_01346Parafibromin. (515 aa)
ALC60_09443Cytoplasmic polyadenylation element-binding protein 1-B. (672 aa)
ALC60_09901Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (611 aa)
ALC60_01332Regulation of nuclear pre-mRNA domain-containing protein 1B. (336 aa)
ALC60_10205Integrator complex subunit 4. (917 aa)
ALC60_10428UPF0406 protein C16orf57 like protein. (256 aa)
ALC60_10419RNA-binding protein 16. (1511 aa)
ALC60_10765Exosome complex exonuclease RRP41. (272 aa)
ALC60_11105Exosome complex exonuclease RRP45. (389 aa)
ALC60_11164DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa)
ALC60_11565rRNA 2'-O-methyltransferase fibrillarin. (307 aa)
ALC60_00716Cell cycle regulator Mat89Bb like protein. (678 aa)
ALC60_00306Cleavage and polyadenylation specificity factor subunit 4. (290 aa)
ALC60_02176U7 snRNA-associated Sm-like protein LSm11. (210 aa)
ALC60_02500Cleavage and polyadenylation specificity factor subunit 2. (737 aa)
ALC60_02757H/ACA ribonucleoprotein complex subunit 4. (477 aa)
ALC60_02706Cleavage and polyadenylation specificity factor subunit 3. (684 aa)
ALC60_02704Integrator complex subunit 8. (997 aa)
ALC60_02862Exosome complex exonuclease RRP46. (307 aa)
ALC60_03114Pre-mRNA 3'-end-processing factor FIP1. (471 aa)
ALC60_03194RRM domain-containing protein. (710 aa)
ALC60_03714Exosome complex exonuclease RRP4. (122 aa)
ALC60_03715Exosome complex exonuclease RRP4. (161 aa)
ALC60_03674Integrator complex subunit 6. (1019 aa)
ALC60_03855Cleavage stimulation factor subunit 1. (474 aa)
ALC60_04246Protein suppressor of forked. (687 aa)
ALC60_04627Poly(A) RNA polymerase, mitochondrial. (578 aa)
ALC60_04981Integrator complex subunit 1. (2040 aa)
ALC60_04971tRNA-nucleotidyltransferase 1, mitochondrial; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (480 aa)
ALC60_05585Putative RNA exonuclease NEF-sp. (695 aa)
ALC60_05800Poly(A) RNA polymerase gld-2 like protein A. (657 aa)
ALC60_06012Exosome complex exonuclease RRP42. (292 aa)
ALC60_06108Cleavage and polyadenylation specificity factor subunit 1. (1607 aa)
ALC60_06208ERI1 exoribonuclease 3. (231 aa)
ALC60_06579Integrator complex subunit 5. (931 aa)
ALC60_06613Integrator complex subunit 11. (595 aa)
ALC60_06862Poly(A) RNA polymerase protein cid1. (406 aa)
ALC60_06713Pentatricopeptide repeat-containing protein 1. (503 aa)
ALC60_07078Integrator complex subunit 9. (594 aa)
ALC60_07347Cleavage stimulation factor subunit 2. (483 aa)
ALC60_07609Uncharacterized protein. (152 aa)
ALC60_08016Exosome complex exonuclease RRP43. (278 aa)
ALC60_08212Integrator complex subunit 4. (543 aa)
ALC60_08379La-related protein 7. (835 aa)
ALC60_08658Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
ALC60_08988Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (720 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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