(15 nodes) Adherens junction assembly network (Trachymyrmex zeteki)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_05420	Rap guanine nucleotide exchange factor 2. (1432 aa)
	ALC60_06594	Nephrin. (1414 aa)
	ALC60_07999	Partitioning defective 3 like protein B. (1198 aa)
	ALC60_10040	Uncharacterized protein. (2185 aa)
	ALC60_10473	Protein lap4. (2105 aa)
	ALC60_11939	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (683 aa)
	ALC60_13326	Tubulin-specific chaperone D. (1152 aa)
	ALC60_13562	Krueppel-like factor 15. (387 aa)
	ALC60_14741	Catenin alpha. (901 aa)
	ALC60_00448	Spectrin beta chain, brain 4. (4241 aa)
	ALC60_00538	Partitioning defective 6 like protein gamma. (324 aa)
	ALC60_04268	Tight junction protein ZO-1. (1129 aa)
	ALC60_04932	PDZ domain-containing protein. (103 aa)
	ALC60_04933	MAGUK p55 subfamily member 5; Belongs to the MAGUK family. (1269 aa)
	ALC60_06086	Ras-related protein Rap-1b. (184 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_00448	ALC60_00538	A0A151XJJ0	A0A151XI98	Spectrin beta chain, brain 4.	Partitioning defective 6 like protein gamma.	0.647
ALC60_00448	ALC60_04932	A0A151XJJ0	A0A151X740	Spectrin beta chain, brain 4.	PDZ domain-containing protein.	0.480
ALC60_00448	ALC60_04933	A0A151XJJ0	A0A151X702	Spectrin beta chain, brain 4.	MAGUK p55 subfamily member 5; Belongs to the MAGUK family.	0.480
ALC60_00448	ALC60_06086	A0A151XJJ0	A0A151X3U7	Spectrin beta chain, brain 4.	Ras-related protein Rap-1b.	0.466
ALC60_00448	ALC60_10040	A0A151XJJ0	A0A151WSY1	Spectrin beta chain, brain 4.	Uncharacterized protein.	0.662
ALC60_00538	ALC60_00448	A0A151XI98	A0A151XJJ0	Partitioning defective 6 like protein gamma.	Spectrin beta chain, brain 4.	0.647
ALC60_00538	ALC60_04268	A0A151XI98	A0A151X8K9	Partitioning defective 6 like protein gamma.	Tight junction protein ZO-1.	0.421
ALC60_00538	ALC60_04932	A0A151XI98	A0A151X740	Partitioning defective 6 like protein gamma.	PDZ domain-containing protein.	0.897
ALC60_00538	ALC60_04933	A0A151XI98	A0A151X702	Partitioning defective 6 like protein gamma.	MAGUK p55 subfamily member 5; Belongs to the MAGUK family.	0.897
ALC60_00538	ALC60_06086	A0A151XI98	A0A151X3U7	Partitioning defective 6 like protein gamma.	Ras-related protein Rap-1b.	0.693
ALC60_00538	ALC60_07999	A0A151XI98	A0A151WYZ3	Partitioning defective 6 like protein gamma.	Partitioning defective 3 like protein B.	0.995
ALC60_00538	ALC60_10040	A0A151XI98	A0A151WSY1	Partitioning defective 6 like protein gamma.	Uncharacterized protein.	0.866
ALC60_00538	ALC60_11939	A0A151XI98	A0A151WMF6	Partitioning defective 6 like protein gamma.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.997
ALC60_04268	ALC60_00538	A0A151X8K9	A0A151XI98	Tight junction protein ZO-1.	Partitioning defective 6 like protein gamma.	0.421
ALC60_04268	ALC60_05420	A0A151X8K9	A0A151X5T9	Tight junction protein ZO-1.	Rap guanine nucleotide exchange factor 2.	0.877
ALC60_04268	ALC60_06086	A0A151X8K9	A0A151X3U7	Tight junction protein ZO-1.	Ras-related protein Rap-1b.	0.518
ALC60_04268	ALC60_06594	A0A151X8K9	A0A151X2F3	Tight junction protein ZO-1.	Nephrin.	0.744
ALC60_04268	ALC60_10040	A0A151X8K9	A0A151WSY1	Tight junction protein ZO-1.	Uncharacterized protein.	0.504
ALC60_04268	ALC60_10473	A0A151X8K9	A0A151WRI2	Tight junction protein ZO-1.	Protein lap4.	0.423
ALC60_04268	ALC60_11939	A0A151X8K9	A0A151WMF6	Tight junction protein ZO-1.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.675