40 items (Trachymyrmex zeteki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_05946	Actin-like protein 13E; Belongs to the actin family. (580 aa)
	ALC60_05933	PHD finger protein 12. (639 aa)
	ALC60_04126	Uncharacterized protein. (107 aa)
	ALC60_03790	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (433 aa)
	ALC60_04107	Transcriptional repressor p66-alpha. (632 aa)
	ALC60_14163	Metastasis-associated protein MTA1. (951 aa)
	ALC60_12812	SAP130_C domain-containing protein. (837 aa)
	ALC60_12703	Bromodomain-containing protein 8. (1134 aa)
	ALC60_12130	Uncharacterized protein. (294 aa)
	ALC60_10762	Protein FAM60A. (325 aa)
	ALC60_10520	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1061 aa)
	ALC60_09636	Uncharacterized protein. (290 aa)
	ALC60_00372	Uncharacterized protein. (166 aa)
	ALC60_00683	Methyl-CpG-binding domain protein 3. (221 aa)
	ALC60_00940	CCHC-type domain-containing protein. (205 aa)
	ALC60_01227	Paired amphipathic helix protein Sin3a. (1514 aa)
	ALC60_01846	Breast cancer metastasis-suppressor 1-like protein-A. (230 aa)
	ALC60_02415	DNA methyltransferase 1-associated protein 1. (455 aa)
	ALC60_02323	Protein EMSY. (692 aa)
	ALC60_02245	Sin3 histone deacetylase corepressor complex component SDS3. (328 aa)
	ALC60_02537	Histone-lysine N-methyltransferase SETD2. (1749 aa)
	ALC60_02585	Nucleic-acid-binding protein from mobile element jockey. (189 aa)
	ALC60_02715	REST corepressor 2. (525 aa)
	ALC60_03018	Uncharacterized protein. (97 aa)
	ALC60_03624	Putative histone-binding protein Caf1. (512 aa)
	ALC60_09437	Uncharacterized protein. (366 aa)
	ALC60_09439	Lysine-specific demethylase 3B. (1696 aa)
	ALC60_08896	Uncharacterized protein. (193 aa)
	ALC60_08920	Histone deacetylase complex subunit SAP30 like protein. (176 aa)
	ALC60_08898	Uncharacterized protein. (226 aa)
	ALC60_08562	AT-rich interactive domain-containing protein 4B. (1512 aa)
	ALC60_08278	Uncharacterized protein. (117 aa)
	ALC60_07264	Actin-related protein 6; Belongs to the actin family. (391 aa)
	ALC60_07105	Histone deacetylase Rpd3. (491 aa)
	ALC60_06691	Uncharacterized protein. (71 aa)
	ALC60_06690	Uncharacterized protein. (77 aa)
	ALC60_06712	Histone deacetylase 6. (1153 aa)
	ALC60_06582	Histone-lysine N-methyltransferase MLL5. (2553 aa)
	ALC60_06025	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (497 aa)
	ALC60_05734	Lysine-specific demethylase 5A. (1653 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_00683	ALC60_01227	A0A151XIY4	A0A151XHG0	Methyl-CpG-binding domain protein 3.	Paired amphipathic helix protein Sin3a.	0.911
ALC60_00683	ALC60_01846	A0A151XIY4	A0A151XG53	Methyl-CpG-binding domain protein 3.	Breast cancer metastasis-suppressor 1-like protein-A.	0.652
ALC60_00683	ALC60_02245	A0A151XIY4	A0A151XE53	Methyl-CpG-binding domain protein 3.	Sin3 histone deacetylase corepressor complex component SDS3.	0.686
ALC60_00683	ALC60_02715	A0A151XIY4	A0A151XD58	Methyl-CpG-binding domain protein 3.	REST corepressor 2.	0.767
ALC60_00683	ALC60_03624	A0A151XIY4	A0A151XBA5	Methyl-CpG-binding domain protein 3.	Putative histone-binding protein Caf1.	0.976
ALC60_00683	ALC60_03790	A0A151XIY4	A0A151XAF7	Methyl-CpG-binding domain protein 3.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.942
ALC60_00683	ALC60_04107	A0A151XIY4	A0A151X961	Methyl-CpG-binding domain protein 3.	Transcriptional repressor p66-alpha.	0.958
ALC60_00683	ALC60_06025	A0A151XIY4	A0A151X3P9	Methyl-CpG-binding domain protein 3.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.951
ALC60_00683	ALC60_06712	A0A151XIY4	A0A151X2G6	Methyl-CpG-binding domain protein 3.	Histone deacetylase 6.	0.920
ALC60_00683	ALC60_07105	A0A151XIY4	A0A151X0P6	Methyl-CpG-binding domain protein 3.	Histone deacetylase Rpd3.	0.951
ALC60_00683	ALC60_08562	A0A151XIY4	A0A151WWV3	Methyl-CpG-binding domain protein 3.	AT-rich interactive domain-containing protein 4B.	0.618
ALC60_00683	ALC60_08920	A0A151XIY4	A0A151WVR3	Methyl-CpG-binding domain protein 3.	Histone deacetylase complex subunit SAP30 like protein.	0.737
ALC60_00683	ALC60_10520	A0A151XIY4	A0A151WRG8	Methyl-CpG-binding domain protein 3.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.886
ALC60_00683	ALC60_14163	A0A151XIY4	A0A151WG30	Methyl-CpG-binding domain protein 3.	Metastasis-associated protein MTA1.	0.987
ALC60_01227	ALC60_00683	A0A151XHG0	A0A151XIY4	Paired amphipathic helix protein Sin3a.	Methyl-CpG-binding domain protein 3.	0.911
ALC60_01227	ALC60_01846	A0A151XHG0	A0A151XG53	Paired amphipathic helix protein Sin3a.	Breast cancer metastasis-suppressor 1-like protein-A.	0.971
ALC60_01227	ALC60_02245	A0A151XHG0	A0A151XE53	Paired amphipathic helix protein Sin3a.	Sin3 histone deacetylase corepressor complex component SDS3.	0.994
ALC60_01227	ALC60_02323	A0A151XHG0	A0A151XE70	Paired amphipathic helix protein Sin3a.	Protein EMSY.	0.917
ALC60_01227	ALC60_02715	A0A151XHG0	A0A151XD58	Paired amphipathic helix protein Sin3a.	REST corepressor 2.	0.932
ALC60_01227	ALC60_03624	A0A151XHG0	A0A151XBA5	Paired amphipathic helix protein Sin3a.	Putative histone-binding protein Caf1.	0.984