STRINGSTRING
ALC60_04222 ALC60_04222 ALC60_11930 ALC60_11930 ALC60_11568 ALC60_11568 ALC60_11564 ALC60_11564 ALC60_07822 ALC60_07822 ALC60_07105 ALC60_07105 ALC60_03655 ALC60_03655 ALC60_02343 ALC60_02343 ALC60_02356 ALC60_02356 ALC60_06025 ALC60_06025 ALC60_04695 ALC60_04695
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_04222Putative oxidoreductase GLYR1 like protein. (495 aa)
ALC60_11930Zinc finger MYM-type protein 3. (1771 aa)
ALC60_11568Chromodomain-helicase-DNA-binding protein 1. (1825 aa)
ALC60_11564TFIIH basal transcription factor complex helicase XPD subunit. (780 aa)
ALC60_07822Arginine-glutamic acid dipeptide repeats protein. (1201 aa)
ALC60_07105Histone deacetylase Rpd3. (491 aa)
ALC60_03655SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (687 aa)
ALC60_02343Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1697 aa)
ALC60_02356Myeloid leukemia factor. (283 aa)
ALC60_06025Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (497 aa)
ALC60_04695Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (453 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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