(27 nodes) Centriolar satellite network (Trachymyrmex zeteki)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_05961	Putative nuclease HARBI1. (107 aa)
	ALC60_14011	Uncharacterized protein. (262 aa)
	ALC60_14329	Zinc finger MYND domain-containing protein 10. (427 aa)
	ALC60_14731	Uncharacterized protein. (154 aa)
	ALC60_13052	N-alpha-acetyltransferase 40, NatD catalytic subunit. (168 aa)
	ALC60_12305	Uncharacterized protein. (143 aa)
	ALC60_11901	Uncharacterized protein. (1107 aa)
	ALC60_11853	Putative nuclease HARBI1. (346 aa)
	ALC60_11394	Uncharacterized protein. (165 aa)
	ALC60_11116	Putative nuclease HARBI1. (115 aa)
	ALC60_09376	C2 domain-containing protein 3. (1710 aa)
	ALC60_08610	Uncharacterized protein. (120 aa)
	ALC60_08437	Putative nuclease HARBI1. (283 aa)
	ALC60_08503	Putative nuclease HARBI1. (116 aa)
	ALC60_07977	DUF4201 domain-containing protein. (405 aa)
	ALC60_07611	Putative nuclease HARBI1. (160 aa)
	ALC60_07042	Putative nuclease HARBI1. (112 aa)
	ALC60_06679	Outer dense fiber protein 2. (983 aa)
	ALC60_06313	Putative nuclease HARBI1. (179 aa)
	ALC60_02242	5-azacytidine-induced protein 1. (787 aa)
	ALC60_05754	Uncharacterized protein. (69 aa)
	ALC60_13318	Uncharacterized protein. (81 aa)
	ALC60_00936	Uncharacterized protein. (191 aa)
	ALC60_01393	Uncharacterized protein. (182 aa)
	ALC60_02021	Putative nuclease HARBI1. (168 aa)
	ALC60_05017	WD repeat-containing protein 13. (443 aa)
	ALC60_04686	Putative nuclease HARBI1. (358 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_02021	ALC60_14011	A0A151XF19	A0A151WGP0	Putative nuclease HARBI1.	Uncharacterized protein.	0.415
ALC60_02242	ALC60_11901	A0A151XE12	A0A151WLT7	5-azacytidine-induced protein 1.	Uncharacterized protein.	0.829
ALC60_05017	ALC60_14329	A0A151X6S5	A0A151WFF5	WD repeat-containing protein 13.	Zinc finger MYND domain-containing protein 10.	0.402
ALC60_05961	ALC60_08437	A0A151X4F0	A0A151WWY0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.426
ALC60_05961	ALC60_11853	A0A151X4F0	A0A151WMM0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.449
ALC60_06313	ALC60_11853	A0A151X307	A0A151WMM0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.491
ALC60_06313	ALC60_14011	A0A151X307	A0A151WGP0	Putative nuclease HARBI1.	Uncharacterized protein.	0.517
ALC60_06679	ALC60_14329	A0A151X200	A0A151WFF5	Outer dense fiber protein 2.	Zinc finger MYND domain-containing protein 10.	0.411
ALC60_07042	ALC60_11853	A0A151X1D3	A0A151WMM0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.454
ALC60_07042	ALC60_14011	A0A151X1D3	A0A151WGP0	Putative nuclease HARBI1.	Uncharacterized protein.	0.493
ALC60_07611	ALC60_08503	A0A151WZD3	A0A151WXJ5	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.505
ALC60_07611	ALC60_11853	A0A151WZD3	A0A151WMM0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.474
ALC60_07611	ALC60_14011	A0A151WZD3	A0A151WGP0	Putative nuclease HARBI1.	Uncharacterized protein.	0.499
ALC60_08437	ALC60_05961	A0A151WWY0	A0A151X4F0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.426
ALC60_08503	ALC60_07611	A0A151WXJ5	A0A151WZD3	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.505
ALC60_08503	ALC60_14011	A0A151WXJ5	A0A151WGP0	Putative nuclease HARBI1.	Uncharacterized protein.	0.520
ALC60_09376	ALC60_11901	A0A151WUH4	A0A151WLT7	C2 domain-containing protein 3.	Uncharacterized protein.	0.489
ALC60_11853	ALC60_05961	A0A151WMM0	A0A151X4F0	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.449
ALC60_11853	ALC60_06313	A0A151WMM0	A0A151X307	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.491
ALC60_11853	ALC60_07042	A0A151WMM0	A0A151X1D3	Putative nuclease HARBI1.	Putative nuclease HARBI1.	0.454