STRINGSTRING
ALC60_00945 ALC60_00945 ALC60_13863 ALC60_13863 ALC60_01712 ALC60_01712 ALC60_02535 ALC60_02535 ALC60_02840 ALC60_02840 ALC60_03002 ALC60_03002 ALC60_02986 ALC60_02986 ALC60_03000 ALC60_03000 ALC60_02985 ALC60_02985 ALC60_04420 ALC60_04420 ALC60_04284 ALC60_04284 ALC60_04528 ALC60_04528 ALC60_04841 ALC60_04841 ALC60_06438 ALC60_06438 ALC60_06862 ALC60_06862 ALC60_06898 ALC60_06898 PAN3 PAN3 ALC60_10989 ALC60_10989 ALC60_11303 ALC60_11303 PAN2 PAN2 ALC60_12677 ALC60_12677 ALC60_13181 ALC60_13181 ALC60_13417 ALC60_13417 ALC60_00839 ALC60_00839
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_00945CCR4-NOT transcription complex subunit 1. (2613 aa)
ALC60_13863Cell differentiation protein RCD1 like protein. (308 aa)
ALC60_01712Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (204 aa)
ALC60_02535Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (389 aa)
ALC60_02840Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (680 aa)
ALC60_03002CCR4-NOT transcription complex subunit 6. (309 aa)
ALC60_02986CCR4-NOT transcription complex subunit 6. (192 aa)
ALC60_03000Uncharacterized protein. (699 aa)
ALC60_02985CCR4-NOT transcription complex subunit 6-like-B. (458 aa)
ALC60_04420Polyadenylate-binding protein-interacting protein 1. (516 aa)
ALC60_04284CCR4-NOT transcription complex subunit 10-B. (653 aa)
ALC60_04528CCR4-NOT transcription complex subunit 2. (459 aa)
ALC60_04841Poly(A)-specific ribonuclease PARN-like domain-containing protein 1. (593 aa)
ALC60_06438CCR4-NOT transcription complex subunit 7. (315 aa)
ALC60_06862Poly(A) RNA polymerase protein cid1. (406 aa)
ALC60_06898U6 snRNA-specific terminal uridylyltransferase 1. (720 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (675 aa)
ALC60_10989Eukaryotic initiation factor 4A-III. (398 aa)
ALC60_11303UPF0760 protein C2orf29 like protein. (456 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1353 aa)
ALC60_12677Leucine-rich repeat-containing protein 27. (560 aa)
ALC60_13181Polyadenylate-binding protein. (1015 aa)
ALC60_13417Eukaryotic translation initiation factor 4B. (512 aa)
ALC60_00839CCR4-NOT transcription complex subunit 3. (687 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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