STRINGSTRING
ALC60_02422 ALC60_02422 ALC60_00188 ALC60_00188 ALC60_00213 ALC60_00213 ALC60_00942 ALC60_00942 ALC60_01281 ALC60_01281 ALC60_01454 ALC60_01454 ALC60_01646 ALC60_01646 ALC60_01619 ALC60_01619 ALC60_02378 ALC60_02378 ALC60_02757 ALC60_02757 ALC60_03483 ALC60_03483 ALC60_04287 ALC60_04287 ALC60_04609 ALC60_04609 ALC60_04793 ALC60_04793 ALC60_05328 ALC60_05328 ALC60_05823 ALC60_05823 ALC60_05804 ALC60_05804 ALC60_06116 ALC60_06116 ALC60_06206 ALC60_06206 ALC60_06689 ALC60_06689 ALC60_06801 ALC60_06801 ALC60_07036 ALC60_07036 ALC60_08456 ALC60_08456 ALC60_08378 ALC60_08378 ALC60_08499 ALC60_08499 ALC60_08535 ALC60_08535 PIF1 PIF1 ALC60_08648 ALC60_08648 ALC60_08975 ALC60_08975 ALC60_09925 ALC60_09925 ALC60_10615 ALC60_10615 ALC60_10713 ALC60_10713 ALC60_11266 ALC60_11266 ALC60_11267 ALC60_11267 ALC60_11335 ALC60_11335 ALC60_11400 ALC60_11400 ALC60_11732 ALC60_11732 ALC60_12797 ALC60_12797 ALC60_12798 ALC60_12798 ALC60_13392 ALC60_13392 ALC60_13350 ALC60_13350 ALC60_13739 ALC60_13739 ALC60_13706 ALC60_13706 ALC60_13922 ALC60_13922 ALC60_13925 ALC60_13925 ALC60_13924 ALC60_13924 ALC60_13926 ALC60_13926 ALC60_13980 ALC60_13980 ALC60_14053 ALC60_14053 ALC60_14205 ALC60_14205 ALC60_14203 ALC60_14203 ALC60_14393 ALC60_14393 ALC60_14481 ALC60_14481 ALC60_14496 ALC60_14496 ALC60_14498 ALC60_14498 ALC60_14645 ALC60_14645 ALC60_14635 ALC60_14635
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC60_02422Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ALC60_00188RCC1 and BTB domain-containing protein 1. (416 aa)
ALC60_00213Replication factor C subunit 4. (356 aa)
ALC60_00942ATP-dependent DNA helicase; Belongs to the helicase family. (294 aa)
ALC60_01281Histone H2A; Belongs to the histone H2A family. (217 aa)
ALC60_01454Protein SHQ1 like protein. (500 aa)
ALC60_01646Centromere protein I. (658 aa)
ALC60_01619Serine/threonine-protein phosphatase. (303 aa)
ALC60_02378TM2 domain-containing protein almondex. (234 aa)
ALC60_02757H/ACA ribonucleoprotein complex subunit 4. (477 aa)
ALC60_03483Death domain-associated protein 6. (1022 aa)
ALC60_04287X-linked retinitis pigmentosa GTPase regulator like protein. (1871 aa)
ALC60_04609Replication factor C subunit 3. (354 aa)
ALC60_04793Transcriptional regulator ATRX like protein. (2470 aa)
ALC60_05328Uncharacterized protein C16orf73 like protein. (473 aa)
ALC60_05823Uncharacterized protein. (333 aa)
ALC60_05804H/ACA ribonucleoprotein complex subunit 3. (37 aa)
ALC60_06116Transcriptional regulator ATRX. (969 aa)
ALC60_06206Replication factor C subunit 5. (481 aa)
ALC60_06689RCC1 and BTB domain-containing protein 2. (405 aa)
ALC60_06801Chromosome transmission fidelity protein 8 like protein. (105 aa)
ALC60_07036Uncharacterized protein. (381 aa)
ALC60_08456Chromosome transmission fidelity protein 18 like protein. (992 aa)
ALC60_08378H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (118 aa)
ALC60_08499ATP-dependent DNA helicase; Belongs to the helicase family. (868 aa)
ALC60_08535DNA polymerase delta subunit 3. (424 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (620 aa)
ALC60_08648Nucleoplasmin-like protein. (175 aa)
ALC60_08975RCC1 and BTB domain-containing protein 1. (411 aa)
ALC60_09925RCC1 and BTB domain-containing protein 1. (278 aa)
ALC60_10615Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (582 aa)
ALC60_10713ATP-dependent DNA helicase; Belongs to the helicase family. (619 aa)
ALC60_11266RCC1 and BTB domain-containing protein 1. (1803 aa)
ALC60_11267RCC1 and BTB domain-containing protein 1. (176 aa)
ALC60_11335Telomerase Cajal body protein 1. (489 aa)
ALC60_11400ULP_PROTEASE domain-containing protein. (771 aa)
ALC60_11732USP domain-containing protein. (59 aa)
ALC60_12797Uncharacterized protein. (257 aa)
ALC60_12798ATP-dependent DNA helicase; Belongs to the helicase family. (306 aa)
ALC60_13392Werner Syndrome-like exonuclease. (246 aa)
ALC60_13350Sister chromatid cohesion protein DCC1. (396 aa)
ALC60_13739ATP-dependent DNA helicase Q4. (1473 aa)
ALC60_13706Uncharacterized protein. (106 aa)
ALC60_13922RCC1 and BTB domain-containing protein 1. (347 aa)
ALC60_13925RCC1 and BTB domain-containing protein 1. (263 aa)
ALC60_13924RCC1 and BTB domain-containing protein 1. (366 aa)
ALC60_13926RCC1 and BTB domain-containing protein 1. (170 aa)
ALC60_13980Uncharacterized protein. (283 aa)
ALC60_14053Chromatin-remodeling complex ATPase chain Iswi. (1007 aa)
ALC60_14205UCH domain-containing protein. (223 aa)
ALC60_14203ATP-dependent DNA helicase; Belongs to the helicase family. (478 aa)
ALC60_14393Replication factor C subunit 2. (353 aa)
ALC60_14481RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (571 aa)
ALC60_14496RCC1 and BTB domain-containing protein 2. (155 aa)
ALC60_14498Remodeling and spacing factor 1. (3939 aa)
ALC60_14645H/ACA ribonucleoprotein complex subunit 2-like protein. (156 aa)
ALC60_14635Exonuclease 3'-5' domain-containing protein 2. (612 aa)
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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