23 items (Trachymyrmex zeteki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_03225	RNA-binding protein Nova-1. (514 aa)
	ALC60_14560	40S ribosomal protein S3. (242 aa)
	ALC60_12501	Far upstream element-binding protein 1. (731 aa)
	ALC60_12031	Vigilin. (1240 aa)
	ALC60_11688	Putative ATP-dependent RNA helicase DDX43; Belongs to the DEAD box helicase family. (670 aa)
	ALC60_11040	RNA-binding protein pno1. (223 aa)
	ALC60_10833	40S ribosomal protein S3. (226 aa)
	ALC60_10454	Fragile X mental retardation syndrome-related protein 1. (657 aa)
	ALC60_09629	Ankyrin repeat and KH domain-containing protein 1. (3127 aa)
	ALC60_08988	Polyribonucleotide nucleotidyltransferase 1, mitochondrial. (720 aa)
	ALC60_08387	Splicing factor 1. (611 aa)
	ALC60_07455	Heterogeneous nuclear ribonucleoprotein K. (407 aa)
	ALC60_07563	Insulin-like growth factor 2 mRNA-binding protein 1. (593 aa)
	ALC60_04507	Tudor and KH domain-containing protein. (529 aa)
	ALC60_04178	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
	ALC60_03682	KH domain-containing protein. (368 aa)
	ALC60_02600	Poly(RC)-binding protein 3. (310 aa)
	ALC60_02768	Protein bicaudal C. (865 aa)
	ALC60_02536	Activating signal cointegrator 1 complex subunit 1. (851 aa)
	ALC60_02262	KH domain-containing protein C56G2.1. (596 aa)
	ALC60_01087	KH domain-containing, RNA-binding, signal transduction-associated protein 2. (385 aa)
	ALC60_00686	RNA-binding protein MEX3B. (350 aa)
	ALC60_00189	KH domain-containing protein. (514 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_00189	ALC60_02768	A0A151XJZ7	A0A151XDL7	KH domain-containing protein.	Protein bicaudal C.	0.405
ALC60_01087	ALC60_07455	A0A151XHV3	A0A151WZR0	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	Heterogeneous nuclear ribonucleoprotein K.	0.749
ALC60_01087	ALC60_12501	A0A151XHV3	A0A151WL85	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	Far upstream element-binding protein 1.	0.681
ALC60_02600	ALC60_02768	A0A151XCS4	A0A151XDL7	Poly(RC)-binding protein 3.	Protein bicaudal C.	0.716
ALC60_02600	ALC60_07455	A0A151XCS4	A0A151WZR0	Poly(RC)-binding protein 3.	Heterogeneous nuclear ribonucleoprotein K.	0.917
ALC60_02600	ALC60_07563	A0A151XCS4	A0A151X023	Poly(RC)-binding protein 3.	Insulin-like growth factor 2 mRNA-binding protein 1.	0.517
ALC60_02600	ALC60_08387	A0A151XCS4	A0A151WXN2	Poly(RC)-binding protein 3.	Splicing factor 1.	0.401
ALC60_02600	ALC60_09629	A0A151XCS4	A0A151WTV0	Poly(RC)-binding protein 3.	Ankyrin repeat and KH domain-containing protein 1.	0.544
ALC60_02600	ALC60_12031	A0A151XCS4	A0A151WMP2	Poly(RC)-binding protein 3.	Vigilin.	0.595
ALC60_02600	ALC60_12501	A0A151XCS4	A0A151WL85	Poly(RC)-binding protein 3.	Far upstream element-binding protein 1.	0.620
ALC60_02768	ALC60_00189	A0A151XDL7	A0A151XJZ7	Protein bicaudal C.	KH domain-containing protein.	0.405
ALC60_02768	ALC60_02600	A0A151XDL7	A0A151XCS4	Protein bicaudal C.	Poly(RC)-binding protein 3.	0.716
ALC60_02768	ALC60_09629	A0A151XDL7	A0A151WTV0	Protein bicaudal C.	Ankyrin repeat and KH domain-containing protein 1.	0.717
ALC60_02768	ALC60_11688	A0A151XDL7	A0A151WN07	Protein bicaudal C.	Putative ATP-dependent RNA helicase DDX43; Belongs to the DEAD box helicase family.	0.475
ALC60_02768	ALC60_12501	A0A151XDL7	A0A151WL85	Protein bicaudal C.	Far upstream element-binding protein 1.	0.421
ALC60_03225	ALC60_07455	A0A151XBI4	A0A151WZR0	RNA-binding protein Nova-1.	Heterogeneous nuclear ribonucleoprotein K.	0.610
ALC60_03682	ALC60_07455	A0A151XAH2	A0A151WZR0	KH domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.738
ALC60_03682	ALC60_12501	A0A151XAH2	A0A151WL85	KH domain-containing protein.	Far upstream element-binding protein 1.	0.761
ALC60_04178	ALC60_10833	A0A151X940	A0A151WQF8	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	40S ribosomal protein S3.	0.922
ALC60_04178	ALC60_11040	A0A151X940	A0A151WQ95	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	RNA-binding protein pno1.	0.948