11 items (Trachymyrmex zeteki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC60_07653	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (256 aa)
	ALC60_07501	Beta-1,4-N-acetylgalactosaminyltransferase bre-4. (327 aa)
	ALC60_04139	Hexosyltransferase. (448 aa)
	ALC60_02774	Beta-1,4-N-acetylgalactosaminyltransferase bre-4. (347 aa)
	ALC60_02773	Uncharacterized protein. (86 aa)
	ALC60_14759	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family. (388 aa)
	ALC60_14036	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (267 aa)
	ALC60_13120	Hexosyltransferase. (410 aa)
	ALC60_12278	Nudix hydrolase 8. (925 aa)
	ALC60_11310	Hexosyltransferase. (364 aa)
	ALC60_10976	Solute carrier family 25 member 44; Belongs to the mitochondrial carrier (TC 2.A.29) family. (410 aa)

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_02773	ALC60_04139	A0A151XDC6	A0A151X970	Uncharacterized protein.	Hexosyltransferase.	0.562
ALC60_02773	ALC60_10976	A0A151XDC6	A0A151WQ16	Uncharacterized protein.	Solute carrier family 25 member 44; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.588
ALC60_02773	ALC60_11310	A0A151XDC6	A0A151WNZ4	Uncharacterized protein.	Hexosyltransferase.	0.724
ALC60_02773	ALC60_12278	A0A151XDC6	A0A151WLL0	Uncharacterized protein.	Nudix hydrolase 8.	0.759
ALC60_02773	ALC60_13120	A0A151XDC6	A0A151WJ47	Uncharacterized protein.	Hexosyltransferase.	0.562
ALC60_02773	ALC60_14759	A0A151XDC6	A0A151WEU8	Uncharacterized protein.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.688
ALC60_02774	ALC60_04139	A0A151XDA2	A0A151X970	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Hexosyltransferase.	0.871
ALC60_02774	ALC60_07501	A0A151XDA2	A0A151X007	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	0.849
ALC60_02774	ALC60_10976	A0A151XDA2	A0A151WQ16	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Solute carrier family 25 member 44; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.588
ALC60_02774	ALC60_11310	A0A151XDA2	A0A151WNZ4	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Hexosyltransferase.	0.864
ALC60_02774	ALC60_12278	A0A151XDA2	A0A151WLL0	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Nudix hydrolase 8.	0.885
ALC60_02774	ALC60_13120	A0A151XDA2	A0A151WJ47	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Hexosyltransferase.	0.871
ALC60_02774	ALC60_14759	A0A151XDA2	A0A151WEU8	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.850
ALC60_04139	ALC60_02773	A0A151X970	A0A151XDC6	Hexosyltransferase.	Uncharacterized protein.	0.562
ALC60_04139	ALC60_02774	A0A151X970	A0A151XDA2	Hexosyltransferase.	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	0.871
ALC60_04139	ALC60_07501	A0A151X970	A0A151X007	Hexosyltransferase.	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	0.861
ALC60_04139	ALC60_11310	A0A151X970	A0A151WNZ4	Hexosyltransferase.	Hexosyltransferase.	0.855
ALC60_04139	ALC60_12278	A0A151X970	A0A151WLL0	Hexosyltransferase.	Nudix hydrolase 8.	0.607
ALC60_04139	ALC60_14759	A0A151X970	A0A151WEU8	Hexosyltransferase.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.866
ALC60_07501	ALC60_02774	A0A151X007	A0A151XDA2	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	Beta-1,4-N-acetylgalactosaminyltransferase bre-4.	0.849